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The map label for this gene is 78048019

Identifier: 78048019

GI number: 78048019

Start: 2790272

End: 2791594

Strand: Reverse

Name: 78048019

Synonym: XCV2463

Alternate gene names: NA

Gene position: 2791594-2790272 (Counterclockwise)

Preceding gene: 78048020

Following gene: 78048018

Centisome position: 53.91

GC content: 61.3

Gene sequence:

>1323_bases
ATGCATGTTTTCAATGAAGGTGTGCCGCGTGCTGGCAAGAGCTACGACGCGGTAAAGAATCACATCCTCCCCGCGCTCAA
GAAGGGCCGGCGTGTGTTCGCACGGCTCAACGGCTTGCGATTTGATCGCATTGCCAAGCACCTGGGCATTGCCGAAAGCG
ATGTGCAAAGCCTGCTCGTCTTGGTCGATACGAAGGACGTGACCAAGCTTTTTGCGTGCACGCAGGATGAGTCGGGCAAG
TGGTGCATTCCGGACGAGTTCAAGGATTCGTTGGTCGTCATTGATGAGGTGCACGAGTTCTACGTCAATGAGCGCAAGCC
GCTCTCGCCGGCAGTGGAGAATTTCTGGGCGCTGCTCGGCCAGAACGGCGGCGATGCGGTCATCATGACGCAGTGGATCA
ACCGCCTTCACTCTGCGGTCAAGGCGCGCATCGAGAAGAAAAACACCTTCCAGAAGCTCACCGCCATCGGCATGAAGGGC
CGATATCGCGTGACGTATTTCCATACCACCTCGCCGGGGAAGTTCGAGAAGGTGGGCGGGCAGACGCTCAAGTACGACCC
GGCCATTTTTCCGCTGTATGACGGCTATGCCCCTGGTGCCGAAAACACCGAGGTCTACGAAGAGGGTGGCAAGAACGTCT
GGGCAGCGATGGCGGTGCGTGCTGCGATCTTCATCGTTGTCGGTGGTGTTGGCATCTACTTCTTCGTGCACTACTTCACC
AAGGATCGTTCCGATCCGAACAAGCCTGTGGCCTCGGCAAGCCAGACCAATAAGCCCGCGCACGTTGGTGCAGGCTTGGC
AAATGGCGCGCCAAGCGTGCCGATCCAGCCGCCGCCGCCCGATCCGCTCGCCGATCTCACGCAGGAACAGCGCTATGTCG
CCGAGCTTGCCAGCAAGGGCCGTATACGACTGTCGGCGCGTGCGCGGGTAGGCGATCAGGATCGGGCGTGGGTCCAGTGG
ATCGACGAGAGCAACAACGTCATTGAGGAATTGGACCTCACGCAGCTGCGCGCCCTGGGCTATAGCGTCAGCGTCGTTAC
GTACGGCGTGCGCTTGTCAGCTGGCAAGCACATCATGGTGGCGACCGCGTGGCCCTGGACCGCGCCCATTCGTGAGAAGG
ACGCACGGCTCTACAACATGGCCCCCGATGGGAGCGGTGGCGCTGCTGGCGTTGCGACCGTAGGGAGTGACGGCGGCGGC
GCTGACCGCGACCGGGTGCGAGGCGGTGTCATTGAGTACGGGCCGCGCACGCAGGGCACGTTCCCGGACAACAAGGCCTA
CACCACGAACACCACGACGCCGGCCACTACCTTGCAGATGTAG

Upstream 100 bases:

>100_bases
TTCGCCGACGTGTTCAAGATCGGGCCTGCCCTGGTGATGATCGGCGCGGCCATGGTGTTCTATCTGTTGCGTCGCGTGCT
GACGGTCGGGATTTGGTGAC

Downstream 100 bases:

>100_bases
GTAGAATCCCGCTCTCAAGGGGAGGGCGTATGGATATTCGTGCGTTTTTTGTTGTGCTCTTCGTGGCTTCCGTTCCGGCC
AGCGCCCAGCAGGTTTTCAA

Product: filamentous phage phiLf protein I

Products: NA

Alternate protein names: Zonular Occludens xin; Pi Protein; Bacteriophage Protein

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MHVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIAESDVQSLLVLVDTKDVTKLFACTQDESGK
WCIPDEFKDSLVVIDEVHEFYVNERKPLSPAVENFWALLGQNGGDAVIMTQWINRLHSAVKARIEKKNTFQKLTAIGMKG
RYRVTYFHTTSPGKFEKVGGQTLKYDPAIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAAIFIVVGGVGIYFFVHYFT
KDRSDPNKPVASASQTNKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELASKGRIRLSARARVGDQDRAWVQW
IDESNNVIEELDLTQLRALGYSVSVVTYGVRLSAGKHIMVATAWPWTAPIREKDARLYNMAPDGSGGAAGVATVGSDGGG
ADRDRVRGGVIEYGPRTQGTFPDNKAYTTNTTTPATTLQM

Sequences:

>Translated_440_residues
MHVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIAESDVQSLLVLVDTKDVTKLFACTQDESGK
WCIPDEFKDSLVVIDEVHEFYVNERKPLSPAVENFWALLGQNGGDAVIMTQWINRLHSAVKARIEKKNTFQKLTAIGMKG
RYRVTYFHTTSPGKFEKVGGQTLKYDPAIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAAIFIVVGGVGIYFFVHYFT
KDRSDPNKPVASASQTNKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELASKGRIRLSARARVGDQDRAWVQW
IDESNNVIEELDLTQLRALGYSVSVVTYGVRLSAGKHIMVATAWPWTAPIREKDARLYNMAPDGSGGAAGVATVGSDGGG
ADRDRVRGGVIEYGPRTQGTFPDNKAYTTNTTTPATTLQM
>Mature_440_residues
MHVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIAESDVQSLLVLVDTKDVTKLFACTQDESGK
WCIPDEFKDSLVVIDEVHEFYVNERKPLSPAVENFWALLGQNGGDAVIMTQWINRLHSAVKARIEKKNTFQKLTAIGMKG
RYRVTYFHTTSPGKFEKVGGQTLKYDPAIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAAIFIVVGGVGIYFFVHYFT
KDRSDPNKPVASASQTNKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELASKGRIRLSARARVGDQDRAWVQW
IDESNNVIEELDLTQLRALGYSVSVVTYGVRLSAGKHIMVATAWPWTAPIREKDARLYNMAPDGSGGAAGVATVGSDGGG
ADRDRVRGGVIEYGPRTQGTFPDNKAYTTNTTTPATTLQM

Specific function: Unknown

COG id: COG4128

COG function: function code R; Zonula occludens toxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48181; Mature: 48181

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS00690 DEAH_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIAESDVQSLLV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEEE
LVDTKDVTKLFACTQDESGKWCIPDEFKDSLVVIDEVHEFYVNERKPLSPAVENFWALLG
EEECCHHHHHHEECCCCCCCEECCHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHC
QNGGDAVIMTQWINRLHSAVKARIEKKNTFQKLTAIGMKGRYRVTYFHTTSPGKFEKVGG
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCC
QTLKYDPAIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAAIFIVVGGVGIYFFVHYFT
CEEEECCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KDRSDPNKPVASASQTNKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELASKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
RIRLSARARVGDQDRAWVQWIDESNNVIEELDLTQLRALGYSVSVVTYGVRLSAGKHIMV
CEEEEEECCCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEE
ATAWPWTAPIREKDARLYNMAPDGSGGAAGVATVGSDGGGADRDRVRGGVIEYGPRTQGT
EECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEECCCCCCC
FPDNKAYTTNTTTPATTLQM
CCCCCEEECCCCCCCEEECC
>Mature Secondary Structure
MHVFNEGVPRAGKSYDAVKNHILPALKKGRRVFARLNGLRFDRIAKHLGIAESDVQSLLV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHEEEE
LVDTKDVTKLFACTQDESGKWCIPDEFKDSLVVIDEVHEFYVNERKPLSPAVENFWALLG
EEECCHHHHHHEECCCCCCCEECCHHHCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHC
QNGGDAVIMTQWINRLHSAVKARIEKKNTFQKLTAIGMKGRYRVTYFHTTSPGKFEKVGG
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCHHHCCC
QTLKYDPAIFPLYDGYAPGAENTEVYEEGGKNVWAAMAVRAAIFIVVGGVGIYFFVHYFT
CEEEECCCEEECCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
KDRSDPNKPVASASQTNKPAHVGAGLANGAPSVPIQPPPPDPLADLTQEQRYVAELASKG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC
RIRLSARARVGDQDRAWVQWIDESNNVIEELDLTQLRALGYSVSVVTYGVRLSAGKHIMV
CEEEEEECCCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCEEEEEEEEEEECCCCEEEE
ATAWPWTAPIREKDARLYNMAPDGSGGAAGVATVGSDGGGADRDRVRGGVIEYGPRTQGT
EECCCCCCCCCCCCCEEEECCCCCCCCCCEEEEECCCCCCCCHHHHCCCCEEECCCCCCC
FPDNKAYTTNTTTPATTLQM
CCCCCEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA