Click here to switch to the map view.

The map label for this gene is 78048018

Identifier: 78048018

GI number: 78048018

Start: 2789850

End: 2790242

Strand: Reverse

Name: 78048018

Synonym: XCV2462

Alternate gene names: NA

Gene position: 2790242-2789850 (Counterclockwise)

Preceding gene: 78048019

Following gene: 78048016

Centisome position: 53.88

GC content: 58.27

Gene sequence:

>393_bases
ATGGATATTCGTGCGTTTTTTGTTGTGCTCTTCGTGGCTTCCGTTCCGGCCAGCGCCCAGCAGGTTTTCAAGTGCGTGAG
TGGTGCGCAAGTCGTTTACCAGTCGGCTCCGTGTCCAGGCGTTACCGCAAAGCAATGGGATGCTCAGCCTGAGCCGGATA
ACCCGGCGTTGAGGCAAAGGCTTGCCCGTACCGCTGCGCAGCTTCGCGCCCGCAATGCGTCTCCTGTCCGTTCCGGTTCT
GGGACCTATGTGGCTGCCAGTTCTTCCAAGGATCGCTATGCATGTGAGGTTGCCAAAGAGGGGCGTCGTGCAGCCTATGA
AGCTGCCGGCGTGCATCGCTCTTTCGCGCTTTCCAGCTATTGGGACAACGCAGTCCAAGATGCCTGCAAATGA

Upstream 100 bases:

>100_bases
AGGGCACGTTCCCGGACAACAAGGCCTACACCACGAACACCACGACGCCGGCCACTACCTTGCAGATGTAGGTAGAATCC
CGCTCTCAAGGGGAGGGCGT

Downstream 100 bases:

>100_bases
CCCAGGGGTGTAGGGGCATAGCCCCTACGGATAACGCCTTACCCGCGCCGTGGACCTCGTGGCCCACGCGTCCTACGGAT
CACCGTCGATCGATCGGCGG

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MDIRAFFVVLFVASVPASAQQVFKCVSGAQVVYQSAPCPGVTAKQWDAQPEPDNPALRQRLARTAAQLRARNASPVRSGS
GTYVAASSSKDRYACEVAKEGRRAAYEAAGVHRSFALSSYWDNAVQDACK

Sequences:

>Translated_130_residues
MDIRAFFVVLFVASVPASAQQVFKCVSGAQVVYQSAPCPGVTAKQWDAQPEPDNPALRQRLARTAAQLRARNASPVRSGS
GTYVAASSSKDRYACEVAKEGRRAAYEAAGVHRSFALSSYWDNAVQDACK
>Mature_130_residues
MDIRAFFVVLFVASVPASAQQVFKCVSGAQVVYQSAPCPGVTAKQWDAQPEPDNPALRQRLARTAAQLRARNASPVRSGS
GTYVAASSSKDRYACEVAKEGRRAAYEAAGVHRSFALSSYWDNAVQDACK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13986; Mature: 13986

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRAFFVVLFVASVPASAQQVFKCVSGAQVVYQSAPCPGVTAKQWDAQPEPDNPALRQR
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
LARTAAQLRARNASPVRSGSGTYVAASSSKDRYACEVAKEGRRAAYEAAGVHRSFALSSY
HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WDNAVQDACK
HHHHHHHHCC
>Mature Secondary Structure
MDIRAFFVVLFVASVPASAQQVFKCVSGAQVVYQSAPCPGVTAKQWDAQPEPDNPALRQR
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
LARTAAQLRARNASPVRSGSGTYVAASSSKDRYACEVAKEGRRAAYEAAGVHRSFALSSY
HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WDNAVQDACK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA