Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78048012

Identifier: 78048012

GI number: 78048012

Start: 2786566

End: 2786796

Strand: Reverse

Name: 78048012

Synonym: XCV2456

Alternate gene names: NA

Gene position: 2786796-2786566 (Counterclockwise)

Preceding gene: 78048013

Following gene: 78048011

Centisome position: 53.82

GC content: 64.5

Gene sequence:

>231_bases
ATGCGCAAGCTCAAGACCCTGTTCAAGAACAAGACCGCTGCTCTGGCCGCAGTTGGTTCGGCCGCTCTCGTCTCCGCTCC
GGCGTTCGCGTCCGGCGGCGGTGGTGTGGATGTGGGCGATGTTGTGTCGGCCATCCAGGGCGCCGCAGGACCGATTGCTG
CCATCGGCGGTGCAGTGCTGACCGTCATGGTGGGCATCAAGGTCTACAAGTGGGTGCGCCGCGCCATGTAA

Upstream 100 bases:

>100_bases
ATGCCCAGGCCATCGGCAGCGCTATCGCGTTCCTGTGGGCCACGGCGTACGTGTTCCGGCTCATTCGCAAGAAAATTCAA
CAGTCCTAGGAGGACATGCA

Downstream 100 bases:

>100_bases
CGACCACCGGCGGACAGGGCCAACTCCCTCCCGCCGGTCTTTTATGGGGATAGGGCAGGGGAACGGGCGATGGAAGGGTG
GATTTGGTTGGGCGCATGGC

Product: putative phage-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM

Sequences:

>Translated_76_residues
MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM
>Mature_76_residues
MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVLTVMVGIKVYKWVRRAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7485; Mature: 7485

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVL
CCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
TVMVGIKVYKWVRRAM
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKLKTLFKNKTAALAAVGSAALVSAPAFASGGGGVDVGDVVSAIQGAAGPIAAIGGAVL
CCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHH
TVMVGIKVYKWVRRAM
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA