| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78048011
Identifier: 78048011
GI number: 78048011
Start: 2784965
End: 2786374
Strand: Reverse
Name: 78048011
Synonym: XCV2455
Alternate gene names: NA
Gene position: 2786374-2784965 (Counterclockwise)
Preceding gene: 78048012
Following gene: 78048010
Centisome position: 53.81
GC content: 59.5
Gene sequence:
>1410_bases GTGCTTGTAGCGGCAACGCTCGCATGGTGTGGCATGGGCAAGGCGCATGCAGCGAATTGTGATGCAACCTCTGACATGTG CAGCGAGGGCGATGCCTGGAATGCGGCACGTCAGCTTGCAGATTCCCGTGGTCCTGACACCTGCAAACTGGTTGGCGGCA ACAACGCCTCCTACACAGGCCCAAATATTGAGAAAGACCCCGGCAATTCTTCGAAGGACGTGGCTGCGCTCGCTGTGCGA GTTTCCTGTTCGAATGGGTCGCTGCCCTTCTTAGGCACCAAGTACTACGTGACCGCAAAATCGTGCGAGCAGGAGCCTGG GTACACCGGCGGCGGTCCGTGGGGGACATATGTTGGCACCGCGCGCAACGGCAGTATCGGTTGTCGCAATGGGTGCGATG GTGTGTGGTTCGGCAATGGCGACGGTTCTATGACGTGGGGAAGCACGGGCGCAGTGTGCCCGACTGATCCGGAGAAGACG TGCGATGCCATGGGCAAGGGTTATGGATGGAACGGTTACCTCGGCGTGTGTGAGCCGCCGCCGACCGAAGAGTGCCCAGA GGGGCAGGTGCCGGATGGGAAGGGTGGCTGTTCAACCAACAAATGCCCCGAAGGCATGCTCTTGCAGGCTGACGGCACCT GCGCACCAAAGAAGAACGATTGCCCTGCTGGGATGATCAAGTCGCCAACCGGTTCATGCCTTCCAGGCGATGGCCAGTGT GCCGCTGGCGAAGTGCGCGGGCCGGATGGAACGTGCAAGAAGGATGCGGATGGTGACGGCGAACCAGACGGGGACGGCGA GGGCGGTGAGGGCGAGGGCGATAGCAAGAGCGAATTTTCTGGTGGTGACAGTTGTGACTCTCCGCCTAGTTGCAGCGGTG ACGCCATCATGTGCGGACAGGCACGCATTCAATGGCGCATTGATTGCAACACCCGCCGCGATGTAAACATCACAGGTGGT TCGTGCGCGGCCATGCCTGTATGCGTTGGCAAGAACTGCAAGGCATTGGAGTACTCGCAGCTGTTGATGCAATGGCGTGC TGCATGTGCCCTTGAAAAGGCAGCGAACAACAGCGGCGGCGGCACTGGAAACAATGCGGATGTCAAGGCGATTCGCGACG CGATCACCGGCAATGGCACGGCCGATATCGGTGCCGATGGTAAGCCTGCTGACGCGTTTTCCGACGAATCCGGATATGGC GAAGATGGCTATCCTACTGGCGAACTCGATACGCAGGGTTTCGGGTACAGCCGCACCTGCCCAACGATTCCCGATGTCGC AGTGTTCGGCCAGACGTTGCACTTCGACACCTCCAAATTCTGTCAGTGGATGGTGCTTGGCGGCCAAATCGTCTTGGTCA TGGCATCCCTGGTTTCGCTGCGTTTGATGAGTCAAGGAGGTAGCGCGTAA
Upstream 100 bases:
>100_bases GCGCATGGCTGGTGGCCTGCGCGATTGTCTTCGTGGATTTCGAATAATGGGCTGGCTCGCACGCGTGTTTGCATCCGCGA TTGCGCGTCGCCTCGCATAC
Downstream 100 bases:
>100_bases TGCCCTGGTTAATCGCACAACTCGTCACCGCCCTGGCGTGGCTGTTCAAGTCGCGTATCGGCCTATGGATCATGACCGCG CTTGTGTGGCTCGGTATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MLVAATLAWCGMGKAHAANCDATSDMCSEGDAWNAARQLADSRGPDTCKLVGGNNASYTGPNIEKDPGNSSKDVAALAVR VSCSNGSLPFLGTKYYVTAKSCEQEPGYTGGGPWGTYVGTARNGSIGCRNGCDGVWFGNGDGSMTWGSTGAVCPTDPEKT CDAMGKGYGWNGYLGVCEPPPTEECPEGQVPDGKGGCSTNKCPEGMLLQADGTCAPKKNDCPAGMIKSPTGSCLPGDGQC AAGEVRGPDGTCKKDADGDGEPDGDGEGGEGEGDSKSEFSGGDSCDSPPSCSGDAIMCGQARIQWRIDCNTRRDVNITGG SCAAMPVCVGKNCKALEYSQLLMQWRAACALEKAANNSGGGTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYG EDGYPTGELDTQGFGYSRTCPTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA
Sequences:
>Translated_469_residues MLVAATLAWCGMGKAHAANCDATSDMCSEGDAWNAARQLADSRGPDTCKLVGGNNASYTGPNIEKDPGNSSKDVAALAVR VSCSNGSLPFLGTKYYVTAKSCEQEPGYTGGGPWGTYVGTARNGSIGCRNGCDGVWFGNGDGSMTWGSTGAVCPTDPEKT CDAMGKGYGWNGYLGVCEPPPTEECPEGQVPDGKGGCSTNKCPEGMLLQADGTCAPKKNDCPAGMIKSPTGSCLPGDGQC AAGEVRGPDGTCKKDADGDGEPDGDGEGGEGEGDSKSEFSGGDSCDSPPSCSGDAIMCGQARIQWRIDCNTRRDVNITGG SCAAMPVCVGKNCKALEYSQLLMQWRAACALEKAANNSGGGTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYG EDGYPTGELDTQGFGYSRTCPTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA >Mature_469_residues MLVAATLAWCGMGKAHAANCDATSDMCSEGDAWNAARQLADSRGPDTCKLVGGNNASYTGPNIEKDPGNSSKDVAALAVR VSCSNGSLPFLGTKYYVTAKSCEQEPGYTGGGPWGTYVGTARNGSIGCRNGCDGVWFGNGDGSMTWGSTGAVCPTDPEKT CDAMGKGYGWNGYLGVCEPPPTEECPEGQVPDGKGGCSTNKCPEGMLLQADGTCAPKKNDCPAGMIKSPTGSCLPGDGQC AAGEVRGPDGTCKKDADGDGEPDGDGEGGEGEGDSKSEFSGGDSCDSPPSCSGDAIMCGQARIQWRIDCNTRRDVNITGG SCAAMPVCVGKNCKALEYSQLLMQWRAACALEKAANNSGGGTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYG EDGYPTGELDTQGFGYSRTCPTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47938; Mature: 47938
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVAATLAWCGMGKAHAANCDATSDMCSEGDAWNAARQLADSRGPDTCKLVGGNNASYTG CEEEEEEHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC PNIEKDPGNSSKDVAALAVRVSCSNGSLPFLGTKYYVTAKSCEQEPGYTGGGPWGTYVGT CCCCCCCCCCCCCEEEEEEEEECCCCCCCEECEEEEEEECCCCCCCCCCCCCCCCCEEEC ARNGSIGCRNGCDGVWFGNGDGSMTWGSTGAVCPTDPEKTCDAMGKGYGWNGYLGVCEPP CCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCC PTEECPEGQVPDGKGGCSTNKCPEGMLLQADGTCAPKKNDCPAGMIKSPTGSCLPGDGQC CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCC AAGEVRGPDGTCKKDADGDGEPDGDGEGGEGEGDSKSEFSGGDSCDSPPSCSGDAIMCGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC ARIQWRIDCNTRRDVNITGGSCAAMPVCVGKNCKALEYSQLLMQWRAACALEKAANNSGG EEEEEEEECCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC GTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYGEDGYPTGELDTQGFGYSRTC CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA CCCCCHHHHCCEEECCHHHHHEEHHCCCHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLVAATLAWCGMGKAHAANCDATSDMCSEGDAWNAARQLADSRGPDTCKLVGGNNASYTG CEEEEEEHHHCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC PNIEKDPGNSSKDVAALAVRVSCSNGSLPFLGTKYYVTAKSCEQEPGYTGGGPWGTYVGT CCCCCCCCCCCCCEEEEEEEEECCCCCCCEECEEEEEEECCCCCCCCCCCCCCCCCEEEC ARNGSIGCRNGCDGVWFGNGDGSMTWGSTGAVCPTDPEKTCDAMGKGYGWNGYLGVCEPP CCCCCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCC PTEECPEGQVPDGKGGCSTNKCPEGMLLQADGTCAPKKNDCPAGMIKSPTGSCLPGDGQC CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCC AAGEVRGPDGTCKKDADGDGEPDGDGEGGEGEGDSKSEFSGGDSCDSPPSCSGDAIMCGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC ARIQWRIDCNTRRDVNITGGSCAAMPVCVGKNCKALEYSQLLMQWRAACALEKAANNSGG EEEEEEEECCCCCEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC GTGNNADVKAIRDAITGNGTADIGADGKPADAFSDESGYGEDGYPTGELDTQGFGYSRTC CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PTIPDVAVFGQTLHFDTSKFCQWMVLGGQIVLVMASLVSLRLMSQGGSA CCCCCHHHHCCEEECCHHHHHEEHHCCCHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA