| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is blh [H]
Identifier: 78047998
GI number: 78047998
Start: 2777149
End: 2777589
Strand: Reverse
Name: blh [H]
Synonym: XCV2442
Alternate gene names: 78047998
Gene position: 2777589-2777149 (Counterclockwise)
Preceding gene: 78047999
Following gene: 78047997
Centisome position: 53.64
GC content: 63.04
Gene sequence:
>441_bases ATGAAGCTGCGATCGCTTTCGCCTGCCCTGCTGGTGGCCGGCCAATTGTTGCCTGCCGATCTTCCTGCCCTGGCCAGCCT GGGTGTCGCCAGCGTTGTCTGCAACAGGCCAGACAACGAGCAGGCGGATCAACCCGATCATCTGGCCATGCAATCGGCCT GCGCGCAGGCGGGCATGCGTTTCGCTTATCTGCCCGTTGTCGCCGGCGCCATTTCGGAGGACGACGTGCAGCAATTTTGC GAAATGCTGGAGCAACTGCCTGCGCCCGTCGTTGCGTATTGCAGGACGGGAACGCGCTCGACGTCGTTGTGGGCGCTGGC ACAAGTCCGCACCCTCAGGCTCACCACAGACCAGGTTCTGTCGATCGCCGCCGGCGCAGGTTACGACCTTTCCTCACTCG CTCCGCGTCTCATTCGCGACGCGCCATCCAGTCCTGAGTAA
Upstream 100 bases:
>100_bases CGACCGGCCAGGCGTTCGCCTTGGTGTTCGCTGCCTCGCTGGTGGCAGGCGTCTTCCTCCACAGCTTTCTCCATCGCGCC GGCGCGGGAAAACACGTCGC
Downstream 100 bases:
>100_bases ACACCGGTCATGCAAACCCTTTCATTGCTGCAGCTCGTGCTGGGCGGGCTTTCCGGCGTGTTGGTCGGCTTCGTGCTGGG ACTGGTCGGTGGCGGCGGCT
Product: putative secreted protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MKLRSLSPALLVAGQLLPADLPALASLGVASVVCNRPDNEQADQPDHLAMQSACAQAGMRFAYLPVVAGAISEDDVQQFC EMLEQLPAPVVAYCRTGTRSTSLWALAQVRTLRLTTDQVLSIAAGAGYDLSSLAPRLIRDAPSSPE
Sequences:
>Translated_146_residues MKLRSLSPALLVAGQLLPADLPALASLGVASVVCNRPDNEQADQPDHLAMQSACAQAGMRFAYLPVVAGAISEDDVQQFC EMLEQLPAPVVAYCRTGTRSTSLWALAQVRTLRLTTDQVLSIAAGAGYDLSSLAPRLIRDAPSSPE >Mature_146_residues MKLRSLSPALLVAGQLLPADLPALASLGVASVVCNRPDNEQADQPDHLAMQSACAQAGMRFAYLPVVAGAISEDDVQQFC EMLEQLPAPVVAYCRTGTRSTSLWALAQVRTLRLTTDQVLSIAAGAGYDLSSLAPRLIRDAPSSPE
Specific function: Unknown
COG id: COG3453
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 15435; Mature: 15435
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLRSLSPALLVAGQLLPADLPALASLGVASVVCNRPDNEQADQPDHLAMQSACAQAGMR CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC FAYLPVVAGAISEDDVQQFCEMLEQLPAPVVAYCRTGTRSTSLWALAQVRTLRLTTDQVL HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHH SIAAGAGYDLSSLAPRLIRDAPSSPE HHHCCCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKLRSLSPALLVAGQLLPADLPALASLGVASVVCNRPDNEQADQPDHLAMQSACAQAGMR CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCC FAYLPVVAGAISEDDVQQFCEMLEQLPAPVVAYCRTGTRSTSLWALAQVRTLRLTTDQVL HHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHH SIAAGAGYDLSSLAPRLIRDAPSSPE HHHCCCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]