Click here to switch to the map view.

The map label for this gene is 78047943

Identifier: 78047943

GI number: 78047943

Start: 2716501

End: 2716806

Strand: Reverse

Name: 78047943

Synonym: XCV2387

Alternate gene names: NA

Gene position: 2716806-2716501 (Counterclockwise)

Preceding gene: 78047944

Following gene: 78047942

Centisome position: 52.46

GC content: 56.21

Gene sequence:

>306_bases
ATGGCATCACATCGCATCGAAACCTATAGCCAAAGGCTGGCGTTCCCAATCGGTGCTCTCATATTCAGTAGAAGCGTTAA
TCGCCTCATGCAAGCGGGTTATCTGGACCCGATTCCGTACTTCAGACGGCACGCTCGTGGCGACTGGGGTGATGTCAGCG
TTCAGCAATGGCAAGCCAATACCACTGCACTTCAATCGGGTGCGCCGCTGGAATCGCACTACGAGATCCACCCAGGGCTC
GCCATCCGCATCATCACAGATGGAGGCCGTAACGTCACCGCCATCGTGCTGTCGTCCGAAGACTGA

Upstream 100 bases:

>100_bases
CATGCTCTGAAGGAGCTGCCTCGTCAACTTCATCCATCTGACGGAGCTACTTCACTCCGTCAGGAGTGTCGTGGCTCAAT
GACTCATCAAGGAGGAAGCC

Downstream 100 bases:

>100_bases
GCACGATTCACCAGCAGGCCGCCACGGCCGGCAACTTCGACCACCTCGGCCAAGTGCCGATTTCCTTCCCACTGCGGGGC
ATGCCATTGCCCCGCTGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MASHRIETYSQRLAFPIGALIFSRSVNRLMQAGYLDPIPYFRRHARGDWGDVSVQQWQANTTALQSGAPLESHYEIHPGL
AIRIITDGGRNVTAIVLSSED

Sequences:

>Translated_101_residues
MASHRIETYSQRLAFPIGALIFSRSVNRLMQAGYLDPIPYFRRHARGDWGDVSVQQWQANTTALQSGAPLESHYEIHPGL
AIRIITDGGRNVTAIVLSSED
>Mature_100_residues
ASHRIETYSQRLAFPIGALIFSRSVNRLMQAGYLDPIPYFRRHARGDWGDVSVQQWQANTTALQSGAPLESHYEIHPGLA
IRIITDGGRNVTAIVLSSED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11266; Mature: 11135

Theoretical pI: Translated: 7.85; Mature: 7.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASHRIETYSQRLAFPIGALIFSRSVNRLMQAGYLDPIPYFRRHARGDWGDVSVQQWQAN
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEECCC
TTALQSGAPLESHYEIHPGLAIRIITDGGRNVTAIVLSSED
CCEECCCCCCCCCEEECCCEEEEEEECCCCEEEEEEEECCC
>Mature Secondary Structure 
ASHRIETYSQRLAFPIGALIFSRSVNRLMQAGYLDPIPYFRRHARGDWGDVSVQQWQAN
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEECCC
TTALQSGAPLESHYEIHPGLAIRIITDGGRNVTAIVLSSED
CCEECCCCCCCCCEEECCCEEEEEEECCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA