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The map label for this gene is 78047942

Identifier: 78047942

GI number: 78047942

Start: 2714086

End: 2716365

Strand: Reverse

Name: 78047942

Synonym: XCV2386

Alternate gene names: NA

Gene position: 2716365-2714086 (Counterclockwise)

Preceding gene: 78047943

Following gene: 78047941

Centisome position: 52.46

GC content: 64.39

Gene sequence:

>2280_bases
ATGTCCCTCGATCTCGAAACCACCGCCGCTGAAGCCACGCCCGTACAGGGCGAACTGCTCGATGCGGAATCTTCCCCTCT
GACCCTGAGCCTTCAGGATTTCGTCGGCGAATTCGGCGACGAACTGCTCGACGCCCTCAACAGCGCAAACCCGCCGGTCT
ATAACGGCCAGCCACAGACGCGCCGGCAACTCATCGTCGCCGGCCTCAAGCGCAAGCTGTTCCCGGCCCAGGCCGAAGTT
GTCCACGCCGCTGCCGAATTGCTGATCGACCGTGGCGAACGCGCTGCGATCGTCAACGGCGAGATGGGCTGCGGCAAGAC
GACCGTCGGCATCGCCACGGCCGCGGTGCTCAACGCCGAAGGCTACCGCCGCACCCTAGTTCTCTCGCCACCGCACCTTG
TTTACAAGTGGCGGCGTGAGATCCAGGAAACCGTAGCAGGTGCCAAGGTCTGGGTGCTCAACGGACCGGATACGCTGGTC
AAACTCATCAAGCTGCGCGAGCAGTTGGGTGTACACCCCACGGGCCAGGAGTTCTTCATCCTGGGGCGCGTGCGGATGCG
GATGGGGTTCCACTGGAAGCCCGTCTTCACCCAGCGGCGTACCCGCCACGGCCACGTGGCTGCGTGCCCGGACTGCGGCA
CGGTCATCACCGACCTCGATGGCGAGCCGGTCAATCCGGTCGCGCTCCAAGCCGAGGAATACCGCAGGAAGTGCAGCCAT
TGCGCCGCGCCCCTGTGGACGCTGATCCGCCCGCGCAGCCTGTCCGGCAGCGACCAGTCCTCGGCCGTGCTGAAAGCCTT
GAAGCGCATCCCGACGATCGGGGAAGTCACCGCGCAGAAGCTGATGCAGAAGTTCGGCGACGGGTTCCTGGCGTCGATGC
TGGGCGACAACATCCACGAGTTCATCAACTTGATGGATGGCAACGGCGAACTGGTCTTCTCTGACCGCCAGGCGCATCGC
ATGGAAAGAGCGATGGCCAACATGGAGTTCGGCTTCGGCGAAGGCGGCTACCAGCCGTCCGAGTTCATCAAGCGCTACCT
GCCACAGGGCACGTTCGACCTGCTCATCGCCGACGAGGCGCACGAGTACAAGAACGGTGGCAGCGCCCAAGGCCAGGCCA
TGGGCGTGCTGGCGGCGAAGGCTCGCAAGACCTTGCTGCTGACCGGCACGTTGATGGGCGGCTACGGCGACGACCTGTTC
CACCTGCTGTTCCGGGCACTGCCTGGACGGATGATCGAAGACGGCTACCGCCCGAGCACGAGTGGGAGCATGACTTCGGC
CGCGATGGCGTTCATGCGCGATCACGGCGTCCTGAAGGACATCTACTCCGAGAGCGCCGGCACGGCGCACAAGACGGCCA
AGGGCACCAAGGTATCGGTGCGCACGGTCAAGGCTCCCGGCTTCGGGCCGAAAGGGGTCTTGCGGTGCATCCTGCCGTTC
ACGATTTTCCTCAAGCTCAAGGACATCGGTGGCAACGTCCTGCCGCCGTATGACGAGGAGTTCCGTGAAGTCGCAATGGA
CACGGCGCAAGCCGCGGCCTACCGCGACCTGGCGGGTCGGCTGACCGCGGAGCTGAAACAGGCTCTGGCGCGACGCGATA
CGACGCTGCTGGGCGTGGTGCTCAACGTGCTGCTTGCCTGGCCGGACTGTTGCTTCCGGTCGGAAACCGTGGTGCATCCG
CGCACGCGCAACACCTTGGCGTTCGTCCCGGCTCAGTTCAACGAGTTCGAGGTGACGCCGAAAGAGCGCGAGCTGATCGA
CATCTGCAAGGAAGAGAAGGCGCAGGGCCGCAAGGTCTTGGCGTACACGGTCTATACCGGCACGCGCGACACCACATCGC
GCTTGAAGGTGCTGCTGGAACAAGAAGGTTTTCGGGTGGCGGTGCTGCGCGCAAGCGTGGACGCCAGCCGCCGCGAGGAC
TGGATCGCCGAGCAACTGGACCGTGGCATCGACGTGCTCATCACCAACCCCGAGCTGGTCAAGACGGGCTTGGACCTGTT
GGACTTCCCGACGATCGTTTTCATGCAGTCGGGCTACAACGTGTACTCGCTCCAGCAGGCGGCACGCCGCTCCTGGCGCA
TCGGACAGAAACAGCCGGTGCGCGTGATCTACCTCGGCTACGCCGGTTCCTCGCAGATGACCTGCCTGGAGCTGATGGCC
AAGAAGATCATGGTCTCGCAGTCCACCTCGGGCGACGTACCCGAATCGGGCCTGGATGTGCTCAACCAGGACGGTGATTC
CGTCGAGGTCGCATTGGCCCGGCAACTGGTCGCCGCCTGA

Upstream 100 bases:

>100_bases
TTCGACCACCTCGGCCAAGTGCCGATTTCCTTCCCACTGCGGGGCATGCCATTGCCCCGCTGGGGGTGGTGCATGCCCCA
TTTTTCTTTGGAGCATCACC

Downstream 100 bases:

>100_bases
TCCCCACGCCAACGCCGGCCTAGCGCCGCCGGCTTTCCGTTGTTCCCACCTAGCAGCCACGTTCACGGTCTCCGTGTACG
TGGCTGCGCTCTTTATCCCA

Product: putative helicase

Products: NA

Alternate protein names: Helicase Domain-Containing Protein; Plasmid-Related Protein; Helicase Domain Protein; Superfamily Protein DNA/RNA Helicase; Helicase Conserved C-Terminal Domain Protein; Dead/Deah Box Helicase; DEAD/DEAH Box Helicase; Helicase Conserved C- Domain Protein; DNA poisomerase III

Number of amino acids: Translated: 759; Mature: 758

Protein sequence:

>759_residues
MSLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQTRRQLIVAGLKRKLFPAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVHPTGQEFFILGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQAHR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
HLLFRALPGRMIEDGYRPSTSGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA

Sequences:

>Translated_759_residues
MSLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQTRRQLIVAGLKRKLFPAQAEV
VHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLV
KLIKLREQLGVHPTGQEFFILGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQAHR
MERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLF
HLLFRALPGRMIEDGYRPSTSGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHP
RTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRRED
WIAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA
>Mature_758_residues
SLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQTRRQLIVAGLKRKLFPAQAEVV
HAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAEGYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVK
LIKLREQLGVHPTGQEFFILGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSHC
AAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHEFINLMDGNGELVFSDRQAHRM
ERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEAHEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFH
LLFRALPGRMIEDGYRPSTSGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPFT
IFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVVLNVLLAWPDCCFRSETVVHPR
TRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVLAYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRREDW
IAEQLDRGIDVLITNPELVKTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMAK
KIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA

Specific function: Unknown

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 83475; Mature: 83344

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQT
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RRQLIVAGLKRKLFPAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCC
GYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKLIKLREQLGVHPTGQEFFI
CCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEE
LGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
EEEHHHHHCCCCCCHHHHHHCCCCCEEECCCCCCEEECCCCCCCCHHEECHHHHHHHHHH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHH
FINLMDGNGELVFSDRQAHRMERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEA
HHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCH
HEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFHLLFRALPGRMIEDGYRPST
HHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCC
SGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVV
HHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LNVLLAWPDCCFRSETVVHPRTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVL
HHHHHHCCHHHCCCCCEECCCCCCEEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCEEE
AYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRREDWIAEQLDRGIDVLITNPELV
EEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECHHHH
KTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
HHCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHH
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA
HHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SLDLETTAAEATPVQGELLDAESSPLTLSLQDFVGEFGDELLDALNSANPPVYNGQPQT
CCCCCCCCCCCCCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
RRQLIVAGLKRKLFPAQAEVVHAAAELLIDRGERAAIVNGEMGCGKTTVGIATAAVLNAE
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCC
GYRRTLVLSPPHLVYKWRREIQETVAGAKVWVLNGPDTLVKLIKLREQLGVHPTGQEFFI
CCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEE
LGRVRMRMGFHWKPVFTQRRTRHGHVAACPDCGTVITDLDGEPVNPVALQAEEYRRKCSH
EEEHHHHHCCCCCCHHHHHHCCCCCEEECCCCCCEEECCCCCCCCHHEECHHHHHHHHHH
CAAPLWTLIRPRSLSGSDQSSAVLKALKRIPTIGEVTAQKLMQKFGDGFLASMLGDNIHE
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHCCCHHH
FINLMDGNGELVFSDRQAHRMERAMANMEFGFGEGGYQPSEFIKRYLPQGTFDLLIADEA
HHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCEEEEEECCH
HEYKNGGSAQGQAMGVLAAKARKTLLLTGTLMGGYGDDLFHLLFRALPGRMIEDGYRPST
HHHCCCCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCHHHCCCCCCC
SGSMTSAAMAFMRDHGVLKDIYSESAGTAHKTAKGTKVSVRTVKAPGFGPKGVLRCILPF
CCCHHHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCCEEEEEEEECCCCCHHHHHHHHHHH
TIFLKLKDIGGNVLPPYDEEFREVAMDTAQAAAYRDLAGRLTAELKQALARRDTTLLGVV
HHEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LNVLLAWPDCCFRSETVVHPRTRNTLAFVPAQFNEFEVTPKERELIDICKEEKAQGRKVL
HHHHHHCCHHHCCCCCEECCCCCCEEEEECCCCCCEECCCCHHHHHHHHHHHHHCCCEEE
AYTVYTGTRDTTSRLKVLLEQEGFRVAVLRASVDASRREDWIAEQLDRGIDVLITNPELV
EEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECHHHH
KTGLDLLDFPTIVFMQSGYNVYSLQQAARRSWRIGQKQPVRVIYLGYAGSSQMTCLELMA
HHCCHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHH
KKIMVSQSTSGDVPESGLDVLNQDGDSVEVALARQLVAA
HHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA