| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78047732
Identifier: 78047732
GI number: 78047732
Start: 2501513
End: 2503951
Strand: Reverse
Name: 78047732
Synonym: XCV2176
Alternate gene names: NA
Gene position: 2503951-2501513 (Counterclockwise)
Preceding gene: 78047733
Following gene: 78047731
Centisome position: 48.35
GC content: 69.0
Gene sequence:
>2439_bases ATGACCACCACGCCCACCGCCATGCCTGTGTCCCCGTCCCACGATGTGATCATCGCCGCCGCCCAACGTGCGGCACGCGC CATCCCGCCGCTGTGGCCGCTCGCCTCCAGCGTTGCGGTCAACCCCTTCCTCGGCCAGGGCAGCGAGCCGTTGGAAATGG CGGGGGCGCGACTGCGGCGCGCGTCCGGTATCGCGATCACCATGCCGCGGTCCTGGTATGCAGAGCGGCTACAGTCCGGC CAGATCGCCGAACAGGATCTGCAAGCCGCCTTGCAGAACGCGCCGGCAGCCCTGCGGCCGCCGAACTTGCCCGCCCTGAA ACAGGCGGTCCAAGCCGCACGCCCTGCCCCGCAGGCGCTCCCCACGGTCGCCGAGCTGGCCCGCGACGCGGATGCGGTCG ACTGGCCCGGCATCGTCAACGAGCGTATCGGTCACTGGGCAGCCGGCTATTTCGACCAGGGCCAGGCGCTGTGGGCGGTC GGCCAGTCCGGTGGCGCCTACAGCACCTGGCGGATCATCGCGACCCACGATCTGACTCCGGAAATCGCCGGCCTGGCAGG TTTCGCACGCTATGTGGCGGAGGCGCCAGCCAATGCCGAAGACGCCATCGTCGACTGCGTCGCTCGCCTGGGACTTTCGC AGGACGCACTGGACGGTTATTTCCACCGCTTGCTGACCACGTTGGGCGGCTGGGGCCAGCTCGCCCGGTATCGGCTCTGG CAGGCAGAGTTGAGCGGCGCAACCGATGCATGCGTCACCGACCTGCTCGCCGTCCGCCTGCTCTGGGAAGCCGCGTTGCT GGGTAACGGCGGCTGCACGCTGGTGCCTGGCTGGCAGAGGGCCGTTGCCGCCTACGCCGAGCCGGTCGCTGCAACGTCGG ACGATGTCATCGACAGCATCCTGCAGGAAGCGGCCGAACGTGCCGCGCAGCGCAAGCTCAGCGCCGTGCTGGCCGCGCCA TCGCCGGCCCAGGTCGCATCTGGGCGTGTGAAGCTGCAAATGGCGTTCTGCATCGATGTGCGCTCGGAAGTTTTCCGCCG CGCGCTGGAAAGCCTCGATTCGGGCATCCAGACCCTCGGGTTTGCAGGGTTTTTCGGCTTGGGCATCGGCCATCGCCGGT TTGCCTCGGACGTGGTCGAAGCGCGCCTGCCCGTATTGCTCACGCCAGGTGTGACCACCTGCGCGGGAGATGCAACGTCG TCGGCAGCCGCCTCCGACCTCAGCGCACGGATCGCGGCACGTGCCAAGCGCGCCTGGGGCCGCTTCAAGCTGGCGGCCAT TTCCTCGTTCGCCTTCGTCGAGGCCACCGGCCCGATCTACGTTGCCAAGCTGCTGCGCGACGGGCTGGCGCTGGCCCGCC CGCATGCACCGGACGAGCCAGCGCCACGCCCTGCCGACGGGCTGGACCTGGAGACCCGGCTGACCATGGCCACGCGCATC CTCAAGGCGATGTCGTTCACCGGCGGCTTCGCCCGGCTGGTGGTACTCGCCGGCCATGGTGCGAAAGTGGTCAACAACCC TCATGCGAGCGCGCTGCACTGCGGCGCATGCGGCGGCTATTCGGGCGAAGTGAACGCGCGGCTGCTCGCCTCGCTGCTCA ACGACAGCCAGGTGCGCGCCGGTCTTGCCGCACGCGGCATCGTCATTCCCGCCGACACGTTATTCCTGGCTGCACTGCAC GACACCACGACCGATGCGGTCACCCTCTACACCGCCGATCACCCTTCGCCCGGGCATGCCGAAGATCTCGCCCAAGCGAG GCAGTGGCTGGGCGCAGCCGGGGCGCTGGCGCGCGGGGAACGTGCCGTGCGCCTGCCCCGCGCGCATCGCAGCCAGGACA TCGCACATCGTGCCCGCGACTGGGCCGAGATTCGCCCCGAATGGGCACTTGCCGGCTGCCAGGCCTTCATCGCCGCACCC CGCTCACGCACTGCCGGGCGCGATCTGGCCGGACGCGCCTTCCTCCACGACTACGACTGGCGCTACGACGACGGCTTCGG CGTGCTGGAGTTGATCCTGACCGCACCGGTCGTCGTCGCCAGCTGGATCAGCCTGCAGTACTACGGATCCACCGTCGCGC CCGAGAGTCTTGGCGCCGGCAACAAGCTGCTGCACAACGTCACCGGCGGCATCGGAGTGGTCGAGGGCAACGGCGGGATC CTGCGCACCGGGTTGCCGTGGCAATCGGTGCATGACGGCCAACGCCTGACCCACGAGCCGCTGCGGCTCTCGGTGTTGAT CGAAGCACCGCCCGAAGCGATCGCCACCATCCTCGAACGGCACCCGCAGGTCCGCGCCCTGTTCGACAACCGTTGGCTGC ATCTGTTCGCCCTGGACGACGAAGGCCGCATGGCGCACCGCTATGCAGGCGACCTGCGTTGGGAGCAGAACGCCAGCGGC GCACGCAGCTGCGATCACTCCGTGCCGATGCTTGCATGA
Upstream 100 bases:
>100_bases CTCCAATGGGCTGTATGCCAACGCCACGATCGATCGCCTGCTCGGCGGCTGGTCCATTCGCAAGACCTCCTGAACCCCTT CACCCCAGGCCCCCACGCTG
Downstream 100 bases:
>100_bases CACACACTCGCCTACCCCGCCACCGGACCGGAGGCGGGAGGGCAGGAAGTGGATTTTCTCCAAGCCAACGAAAACCCCGC CGGATCGGATCAACACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 812; Mature: 811
Protein sequence:
>812_residues MTTTPTAMPVSPSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQGSEPLEMAGARLRRASGIAITMPRSWYAERLQSG QIAEQDLQAALQNAPAALRPPNLPALKQAVQAARPAPQALPTVAELARDADAVDWPGIVNERIGHWAAGYFDQGQALWAV GQSGGAYSTWRIIATHDLTPEIAGLAGFARYVAEAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLARYRLW QAELSGATDACVTDLLAVRLLWEAALLGNGGCTLVPGWQRAVAAYAEPVAATSDDVIDSILQEAAERAAQRKLSAVLAAP SPAQVASGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGLGIGHRRFASDVVEARLPVLLTPGVTTCAGDATS SAAASDLSARIAARAKRAWGRFKLAAISSFAFVEATGPIYVAKLLRDGLALARPHAPDEPAPRPADGLDLETRLTMATRI LKAMSFTGGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGIVIPADTLFLAALH DTTTDAVTLYTADHPSPGHAEDLAQARQWLGAAGALARGERAVRLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAP RSRTAGRDLAGRAFLHDYDWRYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESLGAGNKLLHNVTGGIGVVEGNGGI LRTGLPWQSVHDGQRLTHEPLRLSVLIEAPPEAIATILERHPQVRALFDNRWLHLFALDDEGRMAHRYAGDLRWEQNASG ARSCDHSVPMLA
Sequences:
>Translated_812_residues MTTTPTAMPVSPSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQGSEPLEMAGARLRRASGIAITMPRSWYAERLQSG QIAEQDLQAALQNAPAALRPPNLPALKQAVQAARPAPQALPTVAELARDADAVDWPGIVNERIGHWAAGYFDQGQALWAV GQSGGAYSTWRIIATHDLTPEIAGLAGFARYVAEAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLARYRLW QAELSGATDACVTDLLAVRLLWEAALLGNGGCTLVPGWQRAVAAYAEPVAATSDDVIDSILQEAAERAAQRKLSAVLAAP SPAQVASGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGLGIGHRRFASDVVEARLPVLLTPGVTTCAGDATS SAAASDLSARIAARAKRAWGRFKLAAISSFAFVEATGPIYVAKLLRDGLALARPHAPDEPAPRPADGLDLETRLTMATRI LKAMSFTGGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGIVIPADTLFLAALH DTTTDAVTLYTADHPSPGHAEDLAQARQWLGAAGALARGERAVRLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAP RSRTAGRDLAGRAFLHDYDWRYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESLGAGNKLLHNVTGGIGVVEGNGGI LRTGLPWQSVHDGQRLTHEPLRLSVLIEAPPEAIATILERHPQVRALFDNRWLHLFALDDEGRMAHRYAGDLRWEQNASG ARSCDHSVPMLA >Mature_811_residues TTTPTAMPVSPSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQGSEPLEMAGARLRRASGIAITMPRSWYAERLQSGQ IAEQDLQAALQNAPAALRPPNLPALKQAVQAARPAPQALPTVAELARDADAVDWPGIVNERIGHWAAGYFDQGQALWAVG QSGGAYSTWRIIATHDLTPEIAGLAGFARYVAEAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLARYRLWQ AELSGATDACVTDLLAVRLLWEAALLGNGGCTLVPGWQRAVAAYAEPVAATSDDVIDSILQEAAERAAQRKLSAVLAAPS PAQVASGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLGFAGFFGLGIGHRRFASDVVEARLPVLLTPGVTTCAGDATSS AAASDLSARIAARAKRAWGRFKLAAISSFAFVEATGPIYVAKLLRDGLALARPHAPDEPAPRPADGLDLETRLTMATRIL KAMSFTGGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRAGLAARGIVIPADTLFLAALHD TTTDAVTLYTADHPSPGHAEDLAQARQWLGAAGALARGERAVRLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPR SRTAGRDLAGRAFLHDYDWRYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESLGAGNKLLHNVTGGIGVVEGNGGIL RTGLPWQSVHDGQRLTHEPLRLSVLIEAPPEAIATILERHPQVRALFDNRWLHLFALDDEGRMAHRYAGDLRWEQNASGA RSCDHSVPMLA
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018752 [H]
Pfam domain/function: PF10070 DUF2309 [H]
EC number: NA
Molecular weight: Translated: 86335; Mature: 86204
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPTAMPVSPSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQGSEPLEMAGARLRR CCCCCCCCCCCCCCCEEEEEHHHHHHCCCCCHHCHHHHCCCCCCCCCCCCHHHHHHHHHH ASGIAITMPRSWYAERLQSGQIAEQDLQAALQNAPAALRPPNLPALKQAVQAARPAPQAL CCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHH PTVAELARDADAVDWPGIVNERIGHWAAGYFDQGQALWAVGQSGGAYSTWRIIATHDLTP HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCH EIAGLAGFARYVAEAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLARYRLW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH QAELSGATDACVTDLLAVRLLWEAALLGNGGCTLVPGWQRAVAAYAEPVAATSDDVIDSI HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHH LQEAAERAAQRKLSAVLAAPSPAQVASGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLG HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH FAGFFGLGIGHRRFASDVVEARLPVLLTPGVTTCAGDATSSAAASDLSARIAARAKRAWG HHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC RFKLAAISSFAFVEATGPIYVAKLLRDGLALARPHAPDEPAPRPADGLDLETRLTMATRI CEEHHHHHHHHEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LKAMSFTGGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRA HHHHHCCCCCEEEEEEECCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHH GLAARGIVIPADTLFLAALHDTTTDAVTLYTADHPSPGHAEDLAQARQWLGAAGALARGE HHHHCCEEECCHHHHEEHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC RAVRLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGRDLAGRAFLHDYDW CCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC RYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESLGAGNKLLHNVTGGIGVVEGNGGI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHCCCCEEEEECCCCE LRTGLPWQSVHDGQRLTHEPLRLSVLIEAPPEAIATILERHPQVRALFDNRWLHLFALDD EECCCCCHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEECCCEEEEEEECC EGRMAHRYAGDLRWEQNASGARSCDHSVPMLA CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTTPTAMPVSPSHDVIIAAAQRAARAIPPLWPLASSVAVNPFLGQGSEPLEMAGARLRR CCCCCCCCCCCCCCEEEEEHHHHHHCCCCCHHCHHHHCCCCCCCCCCCCHHHHHHHHHH ASGIAITMPRSWYAERLQSGQIAEQDLQAALQNAPAALRPPNLPALKQAVQAARPAPQAL CCCCEEECCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHH PTVAELARDADAVDWPGIVNERIGHWAAGYFDQGQALWAVGQSGGAYSTWRIIATHDLTP HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEECCCCH EIAGLAGFARYVAEAPANAEDAIVDCVARLGLSQDALDGYFHRLLTTLGGWGQLARYRLW HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHH QAELSGATDACVTDLLAVRLLWEAALLGNGGCTLVPGWQRAVAAYAEPVAATSDDVIDSI HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCHHHHHHH LQEAAERAAQRKLSAVLAAPSPAQVASGRVKLQMAFCIDVRSEVFRRALESLDSGIQTLG HHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH FAGFFGLGIGHRRFASDVVEARLPVLLTPGVTTCAGDATSSAAASDLSARIAARAKRAWG HHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC RFKLAAISSFAFVEATGPIYVAKLLRDGLALARPHAPDEPAPRPADGLDLETRLTMATRI CEEHHHHHHHHEEECCCHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHH LKAMSFTGGFARLVVLAGHGAKVVNNPHASALHCGACGGYSGEVNARLLASLLNDSQVRA HHHHHCCCCCEEEEEEECCCCCEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHH GLAARGIVIPADTLFLAALHDTTTDAVTLYTADHPSPGHAEDLAQARQWLGAAGALARGE HHHHCCEEECCHHHHEEHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC RAVRLPRAHRSQDIAHRARDWAEIRPEWALAGCQAFIAAPRSRTAGRDLAGRAFLHDYDW CCEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCC RYDDGFGVLELILTAPVVVASWISLQYYGSTVAPESLGAGNKLLHNVTGGIGVVEGNGGI CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHCCCCEEEEECCCCE LRTGLPWQSVHDGQRLTHEPLRLSVLIEAPPEAIATILERHPQVRALFDNRWLHLFALDD EECCCCCHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHCCCCCEEEECCCEEEEEEECC EGRMAHRYAGDLRWEQNASGARSCDHSVPMLA CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]