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The map label for this gene is fliC [H]

Identifier: 78047578

GI number: 78047578

Start: 2302710

End: 2303909

Strand: Reverse

Name: fliC [H]

Synonym: XCV2022

Alternate gene names: 78047578

Gene position: 2303909-2302710 (Counterclockwise)

Preceding gene: 78047579

Following gene: 78047577

Centisome position: 44.49

GC content: 64.17

Gene sequence:

>1200_bases
ATGGCACAGGTAATCAACACCAACGTAATGTCGCTGAACGCTCAGCGGAACCTCAACACCAACAGCTCCAGCTTGGCGCT
GAGCATCCAGCAGCTCTCGTCTGGCAAGCGCATCACCAGCTTTGCCGTAGACGCAGCCGGCGGCGCAATCGCCGAGCGCT
TCACGACCCAGATCCGCGGCCTGGACGTTGCCTCGCGCAACGCCAACGACGGCATCTCGCTGTCCCAGACCGCCGAAGGC
GCGATGGAGGAAATCGGCAACAATCTGCAGCGTATCCGCGAGCTGTCGGTGCAGTCGGCGAAAGCAACTAACTCGTCCAC
CGACCGCGAGGCCCTGAATTCCGAAGTCAAGCAGCTGACCGCGGAAATCGACCGCGTCGCCAATCAGACAAGCTTCAACG
GCACCAAGCTGCTGGACGGCTCGTTCTCCGGCGCGCTGTTCCAGGTCGGCGCCGACGCCGGCCAGACCATCGGCATCAAC
AGCATCGCCGACGCCAACATCGATTCGCTGGGCAAGGCCAACTTCGCTGCCGCCGTTTCCGGCGCCGGCGTGAGCGGCAC
CGCCACCGCCTCCGGTTCTGTCAGCGGCATCAGCCTGTCGTTCAAGGACGCCAGCGGTTCGGCCAAGAGCATCACCATTG
CCGACGTCAAGGTCGCTGCCGGCGACACCGCTGCCGACGTCAACAAGAAGGTTGCCTCGGCGATCAACGACAAGCTCGAC
CAGACCGGCATGTACGCCTCGATCAAGAGCGACGGCTCGGTGCAGATCGAATCGCTGAAGGCTGGCCAGGACTTCACCTC
GCTGTCGGCCGGCACCTCCAGCGCCGCTGGCATCACCGTCGGCGCCGGCATCACCACCGCTTCGGCCGCTTCCGGTTCCA
CCGCTTCGACCTTGGGCAGCCTGGATATCTCCACGTTCTCCGGCGCACAGAAAGCACTGGAAATCGTCGACAAGGCGCTG
ACCACGGTCAACTCCTCGCGCGCCGACATGGGTGCGGTGCAGAAGCGCTTCACCTCCACCATCGCCAACCTGAGCGCAAC
CTCGGAAAACCTGTCGGCCTCACGCAGCCGGATCGCCGATACCGACTATGCCAAGGCCACCGCCGAACTGACCCGCACGC
AGATCCTGCAGCAGGCCGGTACCGCGATGCTGGCCCAGGCCAAGTCGGTTCCGCAGAACGTGCTGAGCCTGCTGCAGTAA

Upstream 100 bases:

>100_bases
GTTATTCATCTCAGCAGCGGCAACGGCCAACTTGATGGCCCCCCTGCGGAGGCTCCAGGCAAGTCCCCCTTGCCGGAAAA
ATCGCTTAGGAGAAATCAAA

Downstream 100 bases:

>100_bases
CGGGCAGTCACCTGCCACAGCAATGCGGCAGCGCTCCACAGCATGTCCAAAGCCCCTCTTCGGAGGGGCTATTTTGTGGC
CGCAGCCCGTCCACGCCCGC

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MAQVINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDVASRNANDGISLSQTAEG
AMEEIGNNLQRIRELSVQSAKATNSSTDREALNSEVKQLTAEIDRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGIN
SIADANIDSLGKANFAAAVSGAGVSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLD
QTGMYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGSLDISTFSGAQKALEIVDKAL
TTVNSSRADMGAVQKRFTSTIANLSATSENLSASRSRIADTDYAKATAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ

Sequences:

>Translated_399_residues
MAQVINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDVASRNANDGISLSQTAEG
AMEEIGNNLQRIRELSVQSAKATNSSTDREALNSEVKQLTAEIDRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGIN
SIADANIDSLGKANFAAAVSGAGVSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLD
QTGMYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGSLDISTFSGAQKALEIVDKAL
TTVNSSRADMGAVQKRFTSTIANLSATSENLSASRSRIADTDYAKATAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ
>Mature_398_residues
AQVINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRGLDVASRNANDGISLSQTAEGA
MEEIGNNLQRIRELSVQSAKATNSSTDREALNSEVKQLTAEIDRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINS
IADANIDSLGKANFAAAVSGAGVSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLDQ
TGMYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGSLDISTFSGAQKALEIVDKALT
TVNSSRADMGAVQKRFTSTIANLSATSENLSASRSRIADTDYAKATAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=317, Percent_Identity=40.0630914826498, Blast_Score=167, Evalue=1e-42,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 40412; Mature: 40281

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQVINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRG
CCCEECCCEEEEECCCCCCCCCHHHEEEHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHC
LDVASRNANDGISLSQTAEGAMEEIGNNLQRIRELSVQSAKATNSSTDREALNSEVKQLT
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AEIDRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINSIADANIDSLGKANFAAAVS
HHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCCEECCCCCCCCCHHHCCCCCHHHHCC
GAGVSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLD
CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
QTGMYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGS
HCCCEEEECCCCCEEEEEECCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC
LDISTFSGAQKALEIVDKALTTVNSSRADMGAVQKRFTSTIANLSATSENLSASRSRIAD
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
TDYAKATAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
>Mature Secondary Structure 
AQVINTNVMSLNAQRNLNTNSSSLALSIQQLSSGKRITSFAVDAAGGAIAERFTTQIRG
CCEECCCEEEEECCCCCCCCCHHHEEEHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHC
LDVASRNANDGISLSQTAEGAMEEIGNNLQRIRELSVQSAKATNSSTDREALNSEVKQLT
CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AEIDRVANQTSFNGTKLLDGSFSGALFQVGADAGQTIGINSIADANIDSLGKANFAAAVS
HHHHHHHCCCCCCCCEEECCCCCCEEEEECCCCCCEECCCCCCCCCHHHCCCCCHHHHCC
GAGVSGTATASGSVSGISLSFKDASGSAKSITIADVKVAAGDTAADVNKKVASAINDKLD
CCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH
QTGMYASIKSDGSVQIESLKAGQDFTSLSAGTSSAAGITVGAGITTASAASGSTASTLGS
HCCCEEEECCCCCEEEEEECCCCCHHHHCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC
LDISTFSGAQKALEIVDKALTTVNSSRADMGAVQKRFTSTIANLSATSENLSASRSRIAD
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC
TDYAKATAELTRTQILQQAGTAMLAQAKSVPQNVLSLLQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2123866; 9620973; 7682214 [H]