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The map label for this gene is fliO [H]

Identifier: 78047545

GI number: 78047545

Start: 2270422

End: 2270829

Strand: Reverse

Name: fliO [H]

Synonym: XCV1989

Alternate gene names: 78047545

Gene position: 2270829-2270422 (Counterclockwise)

Preceding gene: 78047546

Following gene: 78047544

Centisome position: 43.85

GC content: 68.38

Gene sequence:

>408_bases
GTGATCGGCCTGCTGGCCACTGCCGCGCCGGTCGCGGCCAAGGCGACCGGGGTCGGCGCGCAGGCACCGTCCTCGCCCAG
CCTGTTTGGCGCAGTCTTTGCATTGCTGTTGGTGCTCGCGCTGATCGTCGGCCTGGGCTGGTTGCTCAAGCGCATGCCCG
GCAGCGGATTCCGCAGCACCGAGGGCCTGCGCGTGGTGACCAGCCTGGCAGTCGGTGCCAAGGAACGTGTGGTGGTGGTG
GAGGTGAACGGCCAGCAGTTGTTGCTGGGCGTCACCGCCGGCGGCATCAGCACCTTGCACACCTTGCCCGAACCGCTGCC
GCCCACGCCCGCACCCACCCTGCCCACTTTCAAGCAACTTCCCAATTTCGCCCAGCTGCTCGCCCAGAAGCTGCGCAAGG
ACCCGTGA

Upstream 100 bases:

>100_bases
GCACCCTGATTGCGCACGGCGAGGTGGTCGTCATCAACGACCGCTTCGGCATCCGCCTGACCGACGTGGTCAGCCCCAGC
GAACGGATCCGGAGGCTGCG

Downstream 100 bases:

>100_bases
CATGTTGAGCCGTTGGAATCGTTGGGGGCGCAGTGTGCGCCTGGTGCTGATCCTGCTGGTGATGAGTTGCCCGCTGCTGG
CCGCGGCCAGCCCGGCCGCG

Product: flagellar biogenesis protein FliO

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MIGLLATAAPVAAKATGVGAQAPSSPSLFGAVFALLLVLALIVGLGWLLKRMPGSGFRSTEGLRVVTSLAVGAKERVVVV
EVNGQQLLLGVTAGGISTLHTLPEPLPPTPAPTLPTFKQLPNFAQLLAQKLRKDP

Sequences:

>Translated_135_residues
MIGLLATAAPVAAKATGVGAQAPSSPSLFGAVFALLLVLALIVGLGWLLKRMPGSGFRSTEGLRVVTSLAVGAKERVVVV
EVNGQQLLLGVTAGGISTLHTLPEPLPPTPAPTLPTFKQLPNFAQLLAQKLRKDP
>Mature_135_residues
MIGLLATAAPVAAKATGVGAQAPSSPSLFGAVFALLLVLALIVGLGWLLKRMPGSGFRSTEGLRVVTSLAVGAKERVVVV
EVNGQQLLLGVTAGGISTLHTLPEPLPPTPAPTLPTFKQLPNFAQLLAQKLRKDP

Specific function: Unknown

COG id: COG3190

COG function: function code N; Flagellar biogenesis protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliO/mopB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022781 [H]

Pfam domain/function: PF04347 FliO [H]

EC number: NA

Molecular weight: Translated: 13852; Mature: 13852

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLLATAAPVAAKATGVGAQAPSSPSLFGAVFALLLVLALIVGLGWLLKRMPGSGFRST
CCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EGLRVVTSLAVGAKERVVVVEVNGQQLLLGVTAGGISTLHTLPEPLPPTPAPTLPTFKQL
CCHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHC
PNFAQLLAQKLRKDP
CHHHHHHHHHHHCCC
>Mature Secondary Structure
MIGLLATAAPVAAKATGVGAQAPSSPSLFGAVFALLLVLALIVGLGWLLKRMPGSGFRST
CCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
EGLRVVTSLAVGAKERVVVVEVNGQQLLLGVTAGGISTLHTLPEPLPPTPAPTLPTFKQL
CCHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCHHHHHHCCCCCCCCCCCCCCHHHHC
PNFAQLLAQKLRKDP
CHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]