Click here to switch to the map view.

The map label for this gene is fliP [H]

Identifier: 78047544

GI number: 78047544

Start: 2269575

End: 2270420

Strand: Reverse

Name: fliP [H]

Synonym: XCV1988

Alternate gene names: 78047544

Gene position: 2270420-2269575 (Counterclockwise)

Preceding gene: 78047545

Following gene: 78047543

Centisome position: 43.84

GC content: 64.78

Gene sequence:

>846_bases
ATGTTGAGCCGTTGGAATCGTTGGGGGCGCAGTGTGCGCCTGGTGCTGATCCTGCTGGTGATGAGTTGCCCGCTGCTGGC
CGCGGCCAGCCCGGCCGCGCTGCCGGCAATGGCGCAGGCCGCGGCACCGGCGGCGACCCCTGCCGCGGTACCGGCCGGTT
CCAATCAGTTGCCGTCGCTGCCGAACGTGAGCGTGGGCCGCATCGGCGACCAGCCGGTGAGCCTGCCGTTGCAGACCTTG
CTGCTGATGACGGCGATCACCCTGCTGCCGTCGATGCTGCTGGTGCTGACCGCCTTCACCCGCATCACCATCGTGCTGGG
CCTGCTGCGCCAGGCGTTGGGCACCGGCCAGACCCCTTCCAACCAGGTACTGCTGGGCCTGGCGATGTTCCTGACCGCGC
TGGTGATGATGCCGGTGTGGCAGAAGATGTGGGGCGCCGGACTGCAGCCGTACCTCAATAACCAGATCGATTTTTCCACT
GCCTGGACGCTCACCACACAGCCGCTGCGCGCCTTCATGCTGGCCCAGATCCGCGAGACCGATCTGATGACCTTCGCCGG
CATGGCCGGCGACGGCAAGTACGCTGGCCCGGACGCAGTACCGTTCCCGGTGCTGGTGGCCTCGTTCGTGACCAGCGAGC
TGAAGACCGCTTTCGAGATCGGTTTTCTGATCTTCATTCCGTTCGTGATCATCGACCTGGTGGTCGCCAGCGTGCTGATG
TCGATGGGCATGATGATGCTGTCGCCGATGCTGATCTCCGCCCCGTTCAAGATCCTGCTGTTCATCCTGGTGGATGGGTG
GGTATTGGTGGTGGGGACGCTGGCTGCGAGCTTTAATGCGTCGTAG

Upstream 100 bases:

>100_bases
GAACCGCTGCCGCCCACGCCCGCACCCACCCTGCCCACTTTCAAGCAACTTCCCAATTTCGCCCAGCTGCTCGCCCAGAA
GCTGCGCAAGGACCCGTGAC

Downstream 100 bases:

>100_bases
GTGTGGACGCGCGGTGCGCGGTAGCGCTTGTCAGTTGACTGATTTTCGCGCACTGCGGGGTTGCATTGCTCAACCATCAG
CTCCGCTTGCCGCTTTTTGC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MLSRWNRWGRSVRLVLILLVMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSLPNVSVGRIGDQPVSLPLQTL
LLMTAITLLPSMLLVLTAFTRITIVLGLLRQALGTGQTPSNQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFST
AWTLTTQPLRAFMLAQIRETDLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLM
SMGMMMLSPMLISAPFKILLFILVDGWVLVVGTLAASFNAS

Sequences:

>Translated_281_residues
MLSRWNRWGRSVRLVLILLVMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSLPNVSVGRIGDQPVSLPLQTL
LLMTAITLLPSMLLVLTAFTRITIVLGLLRQALGTGQTPSNQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFST
AWTLTTQPLRAFMLAQIRETDLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLM
SMGMMMLSPMLISAPFKILLFILVDGWVLVVGTLAASFNAS
>Mature_281_residues
MLSRWNRWGRSVRLVLILLVMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSLPNVSVGRIGDQPVSLPLQTL
LLMTAITLLPSMLLVLTAFTRITIVLGLLRQALGTGQTPSNQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFST
AWTLTTQPLRAFMLAQIRETDLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLM
SMGMMMLSPMLISAPFKILLFILVDGWVLVVGTLAASFNAS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=212, Percent_Identity=56.6037735849057, Blast_Score=232, Evalue=2e-62,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 29960; Mature: 29960

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSRWNRWGRSVRLVLILLVMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSL
CCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PNVSVGRIGDQPVSLPLQTLLLMTAITLLPSMLLVLTAFTRITIVLGLLRQALGTGQTPS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFSTAWTLTTQPLRAFMLAQIRET
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHH
DLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLM
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMGMMMLSPMLISAPFKILLFILVDGWVLVVGTLAASFNAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSRWNRWGRSVRLVLILLVMSCPLLAAASPAALPAMAQAAAPAATPAAVPAGSNQLPSL
CCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PNVSVGRIGDQPVSLPLQTLLLMTAITLLPSMLLVLTAFTRITIVLGLLRQALGTGQTPS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NQVLLGLAMFLTALVMMPVWQKMWGAGLQPYLNNQIDFSTAWTLTTQPLRAFMLAQIRET
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHH
DLMTFAGMAGDGKYAGPDAVPFPVLVASFVTSELKTAFEIGFLIFIPFVIIDLVVASVLM
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMGMMMLSPMLISAPFKILLFILVDGWVLVVGTLAASFNAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 7622217 [H]