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The map label for this gene is efP1 [C]

Identifier: 78047451

GI number: 78047451

Start: 2142892

End: 2143458

Strand: Reverse

Name: efP1 [C]

Synonym: XCV1895

Alternate gene names: 78047451

Gene position: 2143458-2142892 (Counterclockwise)

Preceding gene: 78047452

Following gene: 78047450

Centisome position: 41.39

GC content: 61.55

Gene sequence:

>567_bases
ATGAAAGCCAACGACATCAAGAAAGGCAACGTCGTCGAATACAACGGCGGCATTTACCAGATCCGCGACATCGAACGCAG
CTCGCCGCAGGGCCGCGGCGGCAATGTGCGCTTTCGTTTCATCATGTACAGCGTGCCGGGCGGGGTGAAAACCGACGCCA
GCTTCGATGCCGACGACAACCTGCCGGAAGTGGAGCTGCTGCGCCGGCAGTCCACGTTCTCGTACAAGGATGGCGAAGCG
TTCGTGTTCATGGACGACGAAGACTTCACCCCGTACACGCTGGATGCGGACGTGATCGGCACCGACGCCGGCTACATCAC
CGATGGTCTGACCGGCATCTACGTGCAAGTGATCGACGACCAGCCGGTGGCCGTACAACTGCCGCAGACGGTGACGCTGG
AAGTGGTGGAGACTCCGCCGGAATTGAAGGGCGGCACCGCCACCAAGCGGCCCAAGCCGGCCAAGCTCAACACCGGCATG
GAAATCATGGTGCCCGAGTACATCACCAATGGCGAACGCGTGCTGGTCAACACCACCACGGGCGAATTTGCCGGTCGCGC
CGACTGA

Upstream 100 bases:

>100_bases
CGGGGATTGGGGAATCGGGAATGGGGAATCGTAACGGCGCCCTGCTCTCAGCACCCCGGCCCCGGCTTTTTCGATTTCCC
ATTCCCTACTCCCGATTCCC

Downstream 100 bases:

>100_bases
TGCGTCGCGTTGCTGTTGTCGTAACCGTGGGTGTGCTGGCGGCCTGCAGCGTGCAACAAACACCGACGCAGGCCGCAACG
CCTGCGCCGGTGGCCTGCAC

Product: elongation factor P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDNLPEVELLRRQSTFSYKDGEA
FVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDDQPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGM
EIMVPEYITNGERVLVNTTTGEFAGRAD

Sequences:

>Translated_188_residues
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDNLPEVELLRRQSTFSYKDGEA
FVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDDQPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGM
EIMVPEYITNGERVLVNTTTGEFAGRAD
>Mature_188_residues
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDNLPEVELLRRQSTFSYKDGEA
FVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDDQPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGM
EIMVPEYITNGERVLVNTTTGEFAGRAD

Specific function: Unknown

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family [H]

Homologues:

Organism=Escherichia coli, GI87082061, Length=188, Percent_Identity=42.5531914893617, Blast_Score=154, Evalue=3e-39,
Organism=Escherichia coli, GI1790590, Length=187, Percent_Identity=32.620320855615, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR011897
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C [H]

EC number: NA

Molecular weight: Translated: 20653; Mature: 20653

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS01275 EFP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDN
CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
LPEVELLRRQSTFSYKDGEAFVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDD
CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCEEECCCCEEECCCCEEEEEEECC
QPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGMEIMVPEYITNGERVLVNTTT
CCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCEEEEECCC
GEFAGRAD
CCCCCCCC
>Mature Secondary Structure
MKANDIKKGNVVEYNGGIYQIRDIERSSPQGRGGNVRFRFIMYSVPGGVKTDASFDADDN
CCCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCC
LPEVELLRRQSTFSYKDGEAFVFMDDEDFTPYTLDADVIGTDAGYITDGLTGIYVQVIDD
CCHHHHHHHCCCCCCCCCCEEEEECCCCCCCEEECCCEEECCCCEEECCCCEEEEEEECC
QPVAVQLPQTVTLEVVETPPELKGGTATKRPKPAKLNTGMEIMVPEYITNGERVLVNTTT
CCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHEECCCCEEEEECCC
GEFAGRAD
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]