| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is mtnC [H]
Identifier: 78047440
GI number: 78047440
Start: 2131320
End: 2132018
Strand: Reverse
Name: mtnC [H]
Synonym: XCV1884
Alternate gene names: 78047440
Gene position: 2132018-2131320 (Counterclockwise)
Preceding gene: 78047441
Following gene: 78047439
Centisome position: 41.17
GC content: 63.38
Gene sequence:
>699_bases ATGACACGACCGCAAGCGATCCTCACCGATATCGAAGGTACGACCAGCAGCATTTCGTTCGTCAAGGACGTCTTGTTCCC GTATGCGCGCCGCGCCATGCCGGCCTACGTGCGCGAACACGGCAATCATCCGCAGGTGCGCCATTGGCTCAACCAGGTGG CCGATGAAATCGGCGAGGACGTGCCGGACGAGGTGCTGATCACCACGCTGCAGACCTGGATCGACGAGGACCGCAAGCAC ACCGCGCTCAAGGCCTTGCAGGGCCTGATCTGGGGCGACGGCTACAAGACGGCCGACTTCACTGCACATATCTACGCCGA TGCGGCGATCCAGTTGAAAGCCTGGCACGCAGCGGGCATTCCGCTGTATGTGTATTCGTCCGGCTCGGTGCCGGCGCAGA AACTGTTCTTCGCGCACAGCGACGCGGGCGACCTGAGCGGACTGATCACCGACTGGTTCGACACCGAAGTCGGCCCCAAG CGCGAAAGCGCCAGCTATCGCCGCATCGCCGAGCGCATTGGCGTGCCGGGACCGGAGATCCTGTTCCTGTCGGATGTGAT CGAAGAGCTCGATGCCGCCAAGCGTGCCGGCATGCGCACCGCGCTACTGGACCGCCGGGAGGACTATCCCACGCCGCGTT CGGCCGACGATGTCGGCAGTCACCAGCGCGTGGAGAGTTTTAGCCAGTTGGTGCTGTAA
Upstream 100 bases:
>100_bases TCACCGAGCCGGACGGCTGGGTCGGACATTTCACCGGCACCGAAATCGCCAAACAATTCCCCCGCTACGCCCCCGAGAAA CCTCACAAGGCCAGCTGACG
Downstream 100 bases:
>100_bases GCACGATCTGCAAGCCGATTGCGCTCGTTGCCGTTTGAGCGCAATCGGTGGTTGGCGCCGCGCAGGCCGCTGATATGCTC CGGCTGCGACGCGCCGCATG
Product: putative haloacid dehalogenase-like hydrolase
Products: NA
Alternate protein names: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase [H]
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MTRPQAILTDIEGTTSSISFVKDVLFPYARRAMPAYVREHGNHPQVRHWLNQVADEIGEDVPDEVLITTLQTWIDEDRKH TALKALQGLIWGDGYKTADFTAHIYADAAIQLKAWHAAGIPLYVYSSGSVPAQKLFFAHSDAGDLSGLITDWFDTEVGPK RESASYRRIAERIGVPGPEILFLSDVIEELDAAKRAGMRTALLDRREDYPTPRSADDVGSHQRVESFSQLVL
Sequences:
>Translated_232_residues MTRPQAILTDIEGTTSSISFVKDVLFPYARRAMPAYVREHGNHPQVRHWLNQVADEIGEDVPDEVLITTLQTWIDEDRKH TALKALQGLIWGDGYKTADFTAHIYADAAIQLKAWHAAGIPLYVYSSGSVPAQKLFFAHSDAGDLSGLITDWFDTEVGPK RESASYRRIAERIGVPGPEILFLSDVIEELDAAKRAGMRTALLDRREDYPTPRSADDVGSHQRVESFSQLVL >Mature_231_residues TRPQAILTDIEGTTSSISFVKDVLFPYARRAMPAYVREHGNHPQVRHWLNQVADEIGEDVPDEVLITTLQTWIDEDRKHT ALKALQGLIWGDGYKTADFTAHIYADAAIQLKAWHAAGIPLYVYSSGSVPAQKLFFAHSDAGDLSGLITDWFDTEVGPKR ESASYRRIAERIGVPGPEILFLSDVIEELDAAKRAGMRTALLDRREDYPTPRSADDVGSHQRVESFSQLVL
Specific function: Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone
COG id: COG4229
COG function: function code C; Predicted enolase-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. MasA/mtnC family [H]
Homologues:
Organism=Homo sapiens, GI10864017, Length=251, Percent_Identity=37.4501992031873, Blast_Score=148, Evalue=3e-36, Organism=Caenorhabditis elegans, GI115533232, Length=221, Percent_Identity=45.2488687782805, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6320797, Length=232, Percent_Identity=36.2068965517241, Blast_Score=121, Evalue=9e-29, Organism=Drosophila melanogaster, GI281360080, Length=213, Percent_Identity=41.3145539906103, Blast_Score=159, Evalue=2e-39, Organism=Drosophila melanogaster, GI24644163, Length=213, Percent_Identity=41.3145539906103, Blast_Score=159, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010041 - InterPro: IPR023214 - InterPro: IPR006439 [H]
Pfam domain/function: NA
EC number: =3.1.3.77 [H]
Molecular weight: Translated: 25905; Mature: 25774
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPQAILTDIEGTTSSISFVKDVLFPYARRAMPAYVREHGNHPQVRHWLNQVADEIGED CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VPDEVLITTLQTWIDEDRKHTALKALQGLIWGDGYKTADFTAHIYADAAIQLKAWHAAGI CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEECCCC PLYVYSSGSVPAQKLFFAHSDAGDLSGLITDWFDTEVGPKRESASYRRIAERIGVPGPEI EEEEEECCCCCHHHHHEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCE LFLSDVIEELDAAKRAGMRTALLDRREDYPTPRSADDVGSHQRVESFSQLVL EHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCC >Mature Secondary Structure TRPQAILTDIEGTTSSISFVKDVLFPYARRAMPAYVREHGNHPQVRHWLNQVADEIGED CCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC VPDEVLITTLQTWIDEDRKHTALKALQGLIWGDGYKTADFTAHIYADAAIQLKAWHAAGI CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEEEEEEECCCC PLYVYSSGSVPAQKLFFAHSDAGDLSGLITDWFDTEVGPKRESASYRRIAERIGVPGPEI EEEEEECCCCCHHHHHEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCE LFLSDVIEELDAAKRAGMRTALLDRREDYPTPRSADDVGSHQRVESFSQLVL EHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]