| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
Click here to switch to the map view.
The map label for this gene is ampG4 [H]
Identifier: 78047398
GI number: 78047398
Start: 2079232
End: 2080182
Strand: Reverse
Name: ampG4 [H]
Synonym: XCV1842
Alternate gene names: 78047398
Gene position: 2080182-2079232 (Counterclockwise)
Preceding gene: 78047402
Following gene: 78047397
Centisome position: 40.17
GC content: 56.78
Gene sequence:
>951_bases ATGGCCTTGATCGGCCTTCTTGTAAGTGTCCGTGAAAACGGGGGTGAACCCGCCCGCCATCTCGACCAACGTCGTGCGCC GGTCGTTAGAAGCACCATGTCGCACCGTCAAGGCTGGATTGTCTTGTCTTCGATCATGGTCGCCATCTCTCTCCTAGGCC TTGTCCTGAGCGTTGTCGCTGGCAGCCTTCCGCTGATTGCACTGAGCTGCATCGCAGCAGCCTTTGGCGGTGCGACCCTG GATGCCTCAGTCGATGCGTTCCGGATCGAACAAGAGGCAGTGCACCAGCAGCCAGCCAAGCTCCTCACTGCCTACCAATT TGGCTACCGCATTGCTCTGCTGTTGAGCGACGGTCTGGTGTTCTTGCTCGCAGCGCGGCTGTCCTGGCAAGTTGCTTATG CAATTCTGCTGCCCCTGATGTTGGTGCCGATCTGCGGAACGCTCTTTCTGCGATCTGCCCCCGATAGCGCTCTCACCCCA GATCGCGCGAGTGCGAAGAAGCAGGGGTCTACGCTGATATCCCTTCGACCCTCCACGCTCCAAGGATGGATCGCGGTCAT CGTCTTCATTGGCTGCTATCGCCTACCGGATATTCTTCTGGGTCCCATGATCAATCCTTTCTTCTATGCCCTTGGCATTG GAAAGAGCGTGGTCGGATCCCTGCATATTTGGCTTGGGATCCCAGCGGCCTTCCTCGGAATTTTGGCTGCAGGCACTAGC TTGAAGCGCATGTCTTTGAGCACGACCATTCTTGTTGGCGCAGCTCTCCAAGCCCTTGCCCTCCTCGTTCTTGCATTGCT TTCGTCCAATGAGCGGTCTGCTGAACTGCTTTGGGCTAGCGTTATTTTTCAAAACCTTGCCAGTAGCTATACCGGCATCG CGTTGGTTGCTTACATGTCAAAGCTGGTCACGCTTGGACGTGACCTGCCCCCACTGAGCCGTACCAGCTGA
Upstream 100 bases:
>100_bases GCCACCTGGGCACAGCTGACGCCGGGCTGGCTGGCCTGCTCAACCGCGCCACGCTTGAACTCGGCAGTGAACTTCCTGCG CTTTGACATGAACACTCCTC
Downstream 100 bases:
>100_bases AGCTATAAAGTCCGTGAACCCAAGAGGACGGACATGAAGAAGAGCAGATTCAGCACCGAGCAGATCATCGGGTTTATCAA ACAGGCCGACGCGGGCATGG
Product: putative major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MALIGLLVSVRENGGEPARHLDQRRAPVVRSTMSHRQGWIVLSSIMVAISLLGLVLSVVAGSLPLIALSCIAAAFGGATL DASVDAFRIEQEAVHQQPAKLLTAYQFGYRIALLLSDGLVFLLAARLSWQVAYAILLPLMLVPICGTLFLRSAPDSALTP DRASAKKQGSTLISLRPSTLQGWIAVIVFIGCYRLPDILLGPMINPFFYALGIGKSVVGSLHIWLGIPAAFLGILAAGTS LKRMSLSTTILVGAALQALALLVLALLSSNERSAELLWASVIFQNLASSYTGIALVAYMSKLVTLGRDLPPLSRTS
Sequences:
>Translated_316_residues MALIGLLVSVRENGGEPARHLDQRRAPVVRSTMSHRQGWIVLSSIMVAISLLGLVLSVVAGSLPLIALSCIAAAFGGATL DASVDAFRIEQEAVHQQPAKLLTAYQFGYRIALLLSDGLVFLLAARLSWQVAYAILLPLMLVPICGTLFLRSAPDSALTP DRASAKKQGSTLISLRPSTLQGWIAVIVFIGCYRLPDILLGPMINPFFYALGIGKSVVGSLHIWLGIPAAFLGILAAGTS LKRMSLSTTILVGAALQALALLVLALLSSNERSAELLWASVIFQNLASSYTGIALVAYMSKLVTLGRDLPPLSRTS >Mature_315_residues ALIGLLVSVRENGGEPARHLDQRRAPVVRSTMSHRQGWIVLSSIMVAISLLGLVLSVVAGSLPLIALSCIAAAFGGATLD ASVDAFRIEQEAVHQQPAKLLTAYQFGYRIALLLSDGLVFLLAARLSWQVAYAILLPLMLVPICGTLFLRSAPDSALTPD RASAKKQGSTLISLRPSTLQGWIAVIVFIGCYRLPDILLGPMINPFFYALGIGKSVVGSLHIWLGIPAAFLGILAAGTSL KRMSLSTTILVGAALQALALLVLALLSSNERSAELLWASVIFQNLASSYTGIALVAYMSKLVTLGRDLPPLSRTS
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 33541; Mature: 33410
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIGLLVSVRENGGEPARHLDQRRAPVVRSTMSHRQGWIVLSSIMVAISLLGLVLSVVA CHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GSLPLIALSCIAAAFGGATLDASVDAFRIEQEAVHQQPAKLLTAYQFGYRIALLLSDGLV CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH FLLAARLSWQVAYAILLPLMLVPICGTLFLRSAPDSALTPDRASAKKQGSTLISLRPSTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECCHHH QGWIAVIVFIGCYRLPDILLGPMINPFFYALGIGKSVVGSLHIWLGIPAAFLGILAAGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH LKRMSLSTTILVGAALQALALLVLALLSSNERSAELLWASVIFQNLASSYTGIALVAYMS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVTLGRDLPPLSRTS HHHHHCCCCCCCCCCC >Mature Secondary Structure ALIGLLVSVRENGGEPARHLDQRRAPVVRSTMSHRQGWIVLSSIMVAISLLGLVLSVVA HHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH GSLPLIALSCIAAAFGGATLDASVDAFRIEQEAVHQQPAKLLTAYQFGYRIALLLSDGLV CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH FLLAARLSWQVAYAILLPLMLVPICGTLFLRSAPDSALTPDRASAKKQGSTLISLRPSTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEEEECCHHH QGWIAVIVFIGCYRLPDILLGPMINPFFYALGIGKSVVGSLHIWLGIPAAFLGILAAGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCH LKRMSLSTTILVGAALQALALLVLALLSSNERSAELLWASVIFQNLASSYTGIALVAYMS HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLVTLGRDLPPLSRTS HHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA