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The map label for this gene is yfcN [C]

Identifier: 78047313

GI number: 78047313

Start: 1979712

End: 1980254

Strand: Reverse

Name: yfcN [C]

Synonym: XCV1757

Alternate gene names: 78047313

Gene position: 1980254-1979712 (Counterclockwise)

Preceding gene: 78047318

Following gene: 78047304

Centisome position: 38.24

GC content: 67.03

Gene sequence:

>543_bases
ATGTCGCATCCTGAAGACGAAGACGACGGCGCGTTGTTCCGCGCAGCGATCGGCGCGGTCAAGCCGATTCGTGAAGTCGC
CCCACCGGCCAACGCCAAGCCACGCCCCAAGCCGCGCGCGCGCATGGCCGAGCGCGACGACGCCCAAGCGCATACCGAAT
TTGCGCGCCTGCTGCGCGACAGCGCGCCGCTGGAAGCGGGCGATACCGCCAGCTATCGGCGCGAGAATCTTCCCACCCGC
TTGTTTCAACGGCTCAAGCGCGGGCAATTCTCGGTGCAGGACGAACTGGATCTGCACGGCGCCACCGCAGCGCAGGCCGA
ATCGTTGCTGCGCCAGTTCCTGCTGGACGCACACGCGCACGAACATGGTTGCGTGCGCATCATCCACGGCAAGGGACTGC
AATCGGACACCGGTGCGCCCGTGCTGAAGAACCTCATGGACCGGCTGCTGCGTCAACGCAACGATGTGCTGGCGTTTCAT
TCGGCGCCGCCGACGCAGGGCGGTACCGGGGCGCTGCTGGTGTTGCTGGCGCGGCGGCGATAG

Upstream 100 bases:

>100_bases
TGGGACTCCTCGGAAAACCGGGCCATGATACCGGATGCGTCCCGCGCCTTCGCGCTTGATCTTCGCGTGCGTCTGCGCTT
GGACCGGGTACGCTGTGCAG

Downstream 100 bases:

>100_bases
GCCGATGATTACGCGCGAGTGATGCGAAACGGCAGCCATTGCGCATGGCGACGTGTTGTCTGGAAGGTCTGTCGCGCATG
CTCGTCGGGCACGAGCCGAT

Product: small MutS-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAQAHTEFARLLRDSAPLEAGDTASYRRENLPTR
LFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLDAHAHEHGCVRIIHGKGLQSDTGAPVLKNLMDRLLRQRNDVLAFH
SAPPTQGGTGALLVLLARRR

Sequences:

>Translated_180_residues
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAQAHTEFARLLRDSAPLEAGDTASYRRENLPTR
LFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLDAHAHEHGCVRIIHGKGLQSDTGAPVLKNLMDRLLRQRNDVLAFH
SAPPTQGGTGALLVLLARRR
>Mature_179_residues
SHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAQAHTEFARLLRDSAPLEAGDTASYRRENLPTRL
FQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLDAHAHEHGCVRIIHGKGLQSDTGAPVLKNLMDRLLRQRNDVLAFHS
APPTQGGTGALLVLLARRR

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=176, Percent_Identity=30.6818181818182, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787602, Length=174, Percent_Identity=28.735632183908, Blast_Score=61, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 19869; Mature: 19738

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAQAHTEFARLLRD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
SAPLEAGDTASYRRENLPTRLFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLDAHAH
CCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
EHGCVRIIHGKGLQSDTGAPVLKNLMDRLLRQRNDVLAFHSAPPTQGGTGALLVLLARRR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SHPEDEDDGALFRAAIGAVKPIREVAPPANAKPRPKPRARMAERDDAQAHTEFARLLRD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
SAPLEAGDTASYRRENLPTRLFQRLKRGQFSVQDELDLHGATAAQAESLLRQFLLDAHAH
CCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCC
EHGCVRIIHGKGLQSDTGAPVLKNLMDRLLRQRNDVLAFHSAPPTQGGTGALLVLLARRR
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA