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The map label for this gene is phaZ

Identifier: 78047013

GI number: 78047013

Start: 1637132

End: 1638475

Strand: Reverse

Name: phaZ

Synonym: XCV1457

Alternate gene names: NA

Gene position: 1638475-1637132 (Counterclockwise)

Preceding gene: 78047014

Following gene: 78047010

Centisome position: 31.64

GC content: 64.29

Gene sequence:

>1344_bases
ATGCTGCGCGGCAGCAAAACCGCACGGATGGGTGGAATGCTTTATCAACTGCATGAGCTGACCCGCAATCTGCTAGCCCC
CTGGGTGCATCAGGCCCAGGCGAACGCCAAGATGTTTTCCGACCCCGACAGCCTGTGGGCCTCGCTCCCGGGCGCCGAGC
GTATGGCCGCCAGCAACGAGCTGTTCCACCGTCTGGGCAAGGAATACGAAAAGCCGGCCTGGGCGCTCGACGATGTCGAG
GTCGACGGCCATTCGCTGCCGATCATCGAACGCGAAGTGCTGAGCAAGCCGTTCTGCCGGTTACTGCGCTTCAAGCGTTT
CAGCGACCACGTCGAACTGATCGGCAAGATGAAGGAGCAGCCCGCCGTGCTGGTGGTTGCGCCGTTGTCCGGCCACCACG
CCACGTTGCTGCGCGACACCGTGCGCACCCTGCTGCGCAACCACAAGGTCTACGTGACCGATTGGGTGGATGCGCGCATG
GTGCCGCTGGAGGCCGGCGCGTTCCGGCTCGAGGACTACATCACCTATATCCAGGAGTTCATCCGCCACATCGGCGCCGA
GCGCCTGCATGTGGTGAGCGTGTGCCAGCCCACCGTTCCGGTGCTGGCGGCAGTGTCGCTGATGGCCAGCAACGACGAGC
CCACCCCGCGCTCGCTGGTGATGATGGGCGGTCCGATCGATGCGCGTCGCAGCCCCACTCAGGTCAACAACCTGGCCACG
GAAAACGGCATCGAGTGGTTCCAGAACAACCTGATCCACACGGTGCCGTTCCCGTATCCGGGCCATGGCCGCCAGGTGTA
TCCGGGCTTCCTGCAGCACGCCGGCTTCCTGTCGATGAACCCCAACCGGCACGTGATGTCGCACTGGGATTTCTACACCG
ACCTGGTCAAGGGCGACCTGCAGGATGCGCAAGCGCACCGGCAGTTCTACGACGAATACAACGCCGTGCTCGACATGCCG
GCCGAGTATTACCTGGACACCATCCGCGTGGTGTTTCAGGAGTTTTTGCTGCCCCAGGGCAAGTGGAAAGTGGACGGCCA
ACTGGTCAAGCCATCGGCGATCCGCAATACCGCGCTGCTGAGCATCGAAGGCGAACTGGACGACATCGCCGGCCTCGGCC
AGACCGAGGCGGTGCACGATCTGTGCACCGGCATCGATGCGGCGCATCGTCGTCACCTGGTCGTGGAAGGCGCCGGTCAC
TACGGCATTTTCAGCGGCCGCCGCTGGCGCGAGGTGGTGTATCCGCAGGTGCGCGAATTCATCGCGCGCTACGATGCGGA
TCCGGTCGGTAGCCGCGACCTGGCCACCGTGACCCCGATCCGCAAGCGCGGCAAACGCGCCTGA

Upstream 100 bases:

>100_bases
CCGCAGTCAAGGCGCTTGCCTCCCAGAAATCGCTGCCACAAAGCCGTGACAGCCTCAACCGTCCGCAGCCCCATTAAGGT
GCAAATGCGCCAAAACCGGT

Downstream 100 bases:

>100_bases
GGTACCCAAGAAAATCCCCGGCAATGCCGGGGATTTTCATCTTGATCTGCGTGCAACCGCCACAGCGCGTCATGCCAGCG
GCAAGCAGCACCATCGACCT

Product: Poly-beta-hydroxyalkanoate depolymerase

Products: NA

Alternate protein names: Intracellular PHB Depolymerase; Polyhydroxyalkanoate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase; PHB Depolymerase; Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Intracellular Poly(3-Hydroxybutyrate) Depolymerase; Intracellular Polyhydroxyalkanoate Depolymerase; Polyhydroxyalkanoate Depolymerase Intracellular Subfamily; Poly(3-Hydroxyalkanoate) Depolymerase; PHB De-Polymerase Domain-Containing Protein; Poly(3-Hydroxybutyrate) Depolymerase; Intracellular PHB Depolymerase Protein; Poly-Beta-Hydroxyalkanoate Depolymerase-Like Protein; Intracellular Poly[D(-)-3-Hydroxybutyrate] Depolymerase; Poly[D(-)-3-Hydroxybutyrate](Phb) Depolymerase; Poly-Beta-Hydroxyalkanoate/Butyrate Depolymerase; Poly-Beta-Hydroxyalkanoate Depolymerase Protein; Poly[D(-)-3-Hydroxyalkanoate] Depolymerase; Polyhydroxybutanoate Depolymerase; Poly-Beta-Hydroxybutyrate Depolymerase

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MLRGSKTARMGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVE
VDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARM
VPLEAGAFRLEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLAT
ENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMP
AEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGH
YGIFSGRRWREVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA

Sequences:

>Translated_447_residues
MLRGSKTARMGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVE
VDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARM
VPLEAGAFRLEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLAT
ENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMP
AEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGH
YGIFSGRRWREVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA
>Mature_447_residues
MLRGSKTARMGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNELFHRLGKEYEKPAWALDDVE
VDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQPAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARM
VPLEAGAFRLEDYITYIQEFIRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLAT
ENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDLQDAQAHRQFYDEYNAVLDMP
AEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALLSIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGH
YGIFSGRRWREVVYPQVREFIARYDADPVGSRDLATVTPIRKRGKRA

Specific function: Unknown

COG id: COG4553

COG function: function code I; Poly-beta-hydroxyalkanoate depolymerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50654; Mature: 50654

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGSKTARMGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHH
LFHRLGKEYEKPAWALDDVEVDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQ
HHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRLEDYITYIQEF
CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHH
IRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLAT
HHHHCCCCEEEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
ENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDL
HHHHHHHHCCCEEECCCCCCCCCCEECCHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCH
QDAQAHRQFYDEYNAVLDMPAEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEECCHHHCCEEEE
SIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWREVVYPQVREF
EECCCHHHHHCCCCHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
IARYDADPVGSRDLATVTPIRKRGKRA
HHHCCCCCCCCCCCCEECHHHHCCCCC
>Mature Secondary Structure
MLRGSKTARMGGMLYQLHELTRNLLAPWVHQAQANAKMFSDPDSLWASLPGAERMAASNE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHH
LFHRLGKEYEKPAWALDDVEVDGHSLPIIEREVLSKPFCRLLRFKRFSDHVELIGKMKEQ
HHHHHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PAVLVVAPLSGHHATLLRDTVRTLLRNHKVYVTDWVDARMVPLEAGAFRLEDYITYIQEF
CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCHHHHHHHHHHHHHH
IRHIGAERLHVVSVCQPTVPVLAAVSLMASNDEPTPRSLVMMGGPIDARRSPTQVNNLAT
HHHHCCCCEEEHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
ENGIEWFQNNLIHTVPFPYPGHGRQVYPGFLQHAGFLSMNPNRHVMSHWDFYTDLVKGDL
HHHHHHHHCCCEEECCCCCCCCCCEECCHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCH
QDAQAHRQFYDEYNAVLDMPAEYYLDTIRVVFQEFLLPQGKWKVDGQLVKPSAIRNTALL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCEEECCEEECCHHHCCEEEE
SIEGELDDIAGLGQTEAVHDLCTGIDAAHRRHLVVEGAGHYGIFSGRRWREVVYPQVREF
EECCCHHHHHCCCCHHHHHHHHHCHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHH
IARYDADPVGSRDLATVTPIRKRGKRA
HHHCCCCCCCCCCCCEECHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA