Click here to switch to the map view.

The map label for this gene is 78047010

Identifier: 78047010

GI number: 78047010

Start: 1633801

End: 1635354

Strand: Reverse

Name: 78047010

Synonym: XCV1454

Alternate gene names: NA

Gene position: 1635354-1633801 (Counterclockwise)

Preceding gene: 78047013

Following gene: 78047008

Centisome position: 31.58

GC content: 63.58

Gene sequence:

>1554_bases
ATGCAAATGACACGCTTGGCGCAGCCGGCCATGGCTGATACTTCCTTTGGTGCCACACGGCGCCTGTGCCTTGCGATCGG
GTTGGCGCTGCCGGGCCTTGGCCTGGCGCAGGTGCAGCCGGCGCCGACCAATGCCGAGCAGGCGGTCGCCGAGCCGGCCA
AAGCGCCGGTCACCGCCGCACCGGCAACCGCCAAGGGCTATCCGCTCGAAGCGCAGGGTTGGGGTGCCAAACAAGGCGGC
AACATGTGGCAGGTGCGCTGGGCCGAAGACTGGTCGTATCTGAAGGACCCGTCCAAGCGCAAGAGTCCGTTCGATCCGCT
CAAGTACATTCCGCTCAACGACGACGGCGATGTGTACGTGTCGCTCAGCAACGAGTTGCGCGTGCGCAGCAATACCATCA
CCAATCCGGGCCTGATTCCCGGCAGCCATTCTCAGCAGCAATATCTGCTGCGCGCCTTCTTCGGCGCCGACTTCCATGTA
GGCGAGCACTTCCGTCTGTACACGGAATTGGCGCATGGCAGCCTGGACGGGCGCAACGAAGGCACCAAGACCGGCACCCA
GGAAAACAACGCGATCCTGCAGCAGGTGTTCTTCGACGTGAAAGGCCGGATCGGCAGCGCCGACACCGGCTTGCGCGTCG
GCCGCCAGGTGTTCGTCGATGGCCCGACCACGCTGATGGCGCTGCGCGACAACACCGATATCTTCGTGACCTTCAACGGC
GCGCGCGCCTGGGCAATTGGCGACAGGACACGTGTTGACCTGTTCGATTTCAATTTCAACATCGATGGCACCGAAGGCCT
CGGCGATGATCGCATCGACCGCTCGCGGCACTTCCGCGGCGTGGTCGGTGGCTACCGCCTGGCGACTGCCAAGCCGATGT
ACCTGGAGCCGTTCTTCTATCAGTTCCGCAACGACAACCAGGTGTGGGGACGCCAGACCGCGGAAGAAAACCGCAATTAC
TACGGCCTGCGCCTGTGGGGCAATGTGGGCAAGCTGCGCACCGATTCGTTCGTGACCGTGCAGCGCGGCAGCTTCGGTGG
ACGCGACCTGCGCGCCTACATGGCCAGTACCTCCAATGCCTGGTCGTTGAGCGAATCGGGCTGGAAGCCGCGCCTGGGCT
TCCATAGCGAAATCGCCTCTGGTGGCGGCGGCACCTCCGGCACCGGCACGTTGCGCAACAACAACTTCCTGTACGGCAAC
ACGATCTACTTCAGCTGGGCCACGTTCTTCGGCCCGGTAAACCTGGTCACGGCTGCACCGACGTTGACGTTCTCGCCGAC
CTCCAAGCTCACCGTGAACCTGGAGTGGGAAACGCTGTGGCGCCAGACCACCAGCGATGCGATCTACAACAACCAGGCAC
GCGCCTACGCACGCACCCAGAACACCGGCGAGCGCCGCATCGGCACCATGCCGCGCATCAACGCCACCTGGAACATCGAC
CCGAACTGGTCGGTGACCTTCCGCGCCGAACATCTGATGGCCGGGCCGGCGTTGGAGAAGGCCGGCTACGGCGATTCGAC
CTTTGTGATGGGCTGGTTGAACTTCCGCTTCTGA

Upstream 100 bases:

>100_bases
ACCTTTGGGTTACTGCCTTTCTGGCACGGCTTTACTACAGTCGGTGTCCCCCCTGCCGATACCTTTCGCCTAGGGGTTTT
CACTTTCGACGGGGAATACG

Downstream 100 bases:

>100_bases
CCACAGCCGTTGGGTGCGTCATGCATCCCCAATAGGCAGTGGCGTCATCACATGCCGCGTCCCGCAAGGACGCGGCATGT
TGTTTTTTACGTGCGGGCAT

Product: putative secreted protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAAPATAKGYPLEAQGWGAKQGG
NMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHV
GEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNG
ARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNY
YGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGN
TIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNID
PNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF

Sequences:

>Translated_517_residues
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAAPATAKGYPLEAQGWGAKQGG
NMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHV
GEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNG
ARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNY
YGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGN
TIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNID
PNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF
>Mature_517_residues
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAAPATAKGYPLEAQGWGAKQGG
NMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYVSLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHV
GEHFRLYTELAHGSLDGRNEGTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNG
ARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFYQFRNDNQVWGRQTAEENRNY
YGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNAWSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGN
TIYFSWATFFGPVNLVTAAPTLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNID
PNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57441; Mature: 57441

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAA
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCEEC
PATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYV
CCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEE
SLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNE
EECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCC
GTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNG
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCEEEEEECC
ARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFY
CEEEEECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCHHE
QFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNA
EECCCCCCCCCCCHHHCCCEEEEEEECCCCCEECCCEEEEECCCCCCHHHHHEECCCCCC
WSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAP
EEECCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCEEEECEEEEEHHHHHCCEEEEEECC
TLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNID
EEEECCCCEEEEEEEHHHHHHHHHCCHHCCCCCCEEEECCCCCCHHCCCCCCCCEEEECC
PNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF
CCEEEEEEEHHHCCCCCHHHCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQMTRLAQPAMADTSFGATRRLCLAIGLALPGLGLAQVQPAPTNAEQAVAEPAKAPVTAA
CCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCHHHHHHCCCCCCCEEC
PATAKGYPLEAQGWGAKQGGNMWQVRWAEDWSYLKDPSKRKSPFDPLKYIPLNDDGDVYV
CCCCCCCCEECCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCEEEEEECCCCCEEE
SLSNELRVRSNTITNPGLIPGSHSQQQYLLRAFFGADFHVGEHFRLYTELAHGSLDGRNE
EECCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEHHHCCCCCCCCC
GTKTGTQENNAILQQVFFDVKGRIGSADTGLRVGRQVFVDGPTTLMALRDNTDIFVTFNG
CCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCEEEEEEECCCEEEEEECC
ARAWAIGDRTRVDLFDFNFNIDGTEGLGDDRIDRSRHFRGVVGGYRLATAKPMYLEPFFY
CEEEEECCCEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEECCHHE
QFRNDNQVWGRQTAEENRNYYGLRLWGNVGKLRTDSFVTVQRGSFGGRDLRAYMASTSNA
EECCCCCCCCCCCHHHCCCEEEEEEECCCCCEECCCEEEEECCCCCCHHHHHEECCCCCC
WSLSESGWKPRLGFHSEIASGGGGTSGTGTLRNNNFLYGNTIYFSWATFFGPVNLVTAAP
EEECCCCCCCCCCCHHHHCCCCCCCCCCCEEECCCEEEECEEEEEHHHHHCCEEEEEECC
TLTFSPTSKLTVNLEWETLWRQTTSDAIYNNQARAYARTQNTGERRIGTMPRINATWNID
EEEECCCCEEEEEEEHHHHHHHHHCCHHCCCCCCEEEECCCCCCHHCCCCCCCCEEEECC
PNWSVTFRAEHLMAGPALEKAGYGDSTFVMGWLNFRF
CCEEEEEEEHHHCCCCCHHHCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA