| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046996
Identifier: 78046996
GI number: 78046996
Start: 1617982
End: 1618719
Strand: Reverse
Name: 78046996
Synonym: XCV1440
Alternate gene names: NA
Gene position: 1618719-1617982 (Counterclockwise)
Preceding gene: 78046997
Following gene: 78046995
Centisome position: 31.26
GC content: 64.5
Gene sequence:
>738_bases GTGTGGTTGTCACTGCACGTGGCTTCGCTCGTACCCTCACCCGCCCCTGCGGGGCACCTTCTCCCCCATGAAGGAGGACA ATGTCCCGGTGGGAGAAGGGACATCCGGCACGGCTTCAACCAACTCCAATCCACCATCCACGCCCCAATGCACCTGGCCC TGTTCGACTTCGACCACACCATCACCACCTGCGACAGCTATGGCCGTTTTCTGCGCAAGGTGGCAACGCCGGCGCAGGTT GCGGCGGCCAGATGGCAGGCGGGGCCATGGGTGCTGGGGTTCCGGATGGGCGTGGTGTCTGCCGCCGCACTGCGCGCGCG GGTGACGCGGCTGGTTTTCAGCGGCCGCTCGCTCGATGAGATGGACGCGCATGGCGCCGAATACGCGCGCACCGCGCTGC CAGGCATGCTGCGCGGCGAGATGATGCAACGCATCGACTGGCATCAGGCGCAGGGACATGAAGTGGTGCTGGTGTCGGCG TCGCTGGATCTGTATCTGCAACCGTGGTGTACCCAGCATGGGTTGTCGCTGATCTGCAATCGGCTGGAACACGCTGCAGG TGTGCTGAGCGGGCGCTATGCCGACGGCGATTGCGGGCCGCACAAGGTCGCGCGGATTTGCAGTCAATACGACTTGCATC GGTACGACTGCGTGCACGCCTATGGCGACAGCCGCGAAGACAAACCGATGCTCGCGCTTGCGCAACAACGCTGGTATCGC GGGCATCTGCTGCACTGA
Upstream 100 bases:
>100_bases GTATTGGAAACACGAACTGATGAGGGATGCGCGAACAGCACGCTCTCAAGCCCCTCTTCTGCAGGAGAGGGGTTGGGTGA GGGTCCGGGGCGAAGCTCTG
Downstream 100 bases:
>100_bases AATGGCCGCGACGTCCGCCCCTGCACCCGATCTGGTCGAACGCCTCGACCGCCTGCTGCCGCAGACCCAATGCGGGCAAT GCGGGTATGACGGCTGTCGT
Product: putative phosphatase
Products: NA
Alternate protein names: Phosphoserine Phosphatase; HAD-Superfamily Subfamily IB Hydrolase; HAD-Superfamily Subfamily IB Hydrolase TIGR; HAD-Superfamily Hydrolase; Phosphatase; Hydrolase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHTITTCDSYGRFLRKVATPAQV AAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDEMDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSA SLDLYLQPWCTQHGLSLICNRLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR GHLLH
Sequences:
>Translated_245_residues MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHTITTCDSYGRFLRKVATPAQV AAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDEMDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSA SLDLYLQPWCTQHGLSLICNRLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR GHLLH >Mature_245_residues MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHTITTCDSYGRFLRKVATPAQV AAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDEMDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSA SLDLYLQPWCTQHGLSLICNRLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR GHLLH
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27274; Mature: 27274
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHT CEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH ITTCDSYGRFLRKVATPAQVAAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDE HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSASLDLYLQPWCTQHGLSLICN HHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCHHHHHHHHHHHH RLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH GHLLH CCCCC >Mature Secondary Structure MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHT CEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH ITTCDSYGRFLRKVATPAQVAAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDE HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH MDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSASLDLYLQPWCTQHGLSLICN HHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCHHHHHHHHHHHH RLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH GHLLH CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA