Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78046996

Identifier: 78046996

GI number: 78046996

Start: 1617982

End: 1618719

Strand: Reverse

Name: 78046996

Synonym: XCV1440

Alternate gene names: NA

Gene position: 1618719-1617982 (Counterclockwise)

Preceding gene: 78046997

Following gene: 78046995

Centisome position: 31.26

GC content: 64.5

Gene sequence:

>738_bases
GTGTGGTTGTCACTGCACGTGGCTTCGCTCGTACCCTCACCCGCCCCTGCGGGGCACCTTCTCCCCCATGAAGGAGGACA
ATGTCCCGGTGGGAGAAGGGACATCCGGCACGGCTTCAACCAACTCCAATCCACCATCCACGCCCCAATGCACCTGGCCC
TGTTCGACTTCGACCACACCATCACCACCTGCGACAGCTATGGCCGTTTTCTGCGCAAGGTGGCAACGCCGGCGCAGGTT
GCGGCGGCCAGATGGCAGGCGGGGCCATGGGTGCTGGGGTTCCGGATGGGCGTGGTGTCTGCCGCCGCACTGCGCGCGCG
GGTGACGCGGCTGGTTTTCAGCGGCCGCTCGCTCGATGAGATGGACGCGCATGGCGCCGAATACGCGCGCACCGCGCTGC
CAGGCATGCTGCGCGGCGAGATGATGCAACGCATCGACTGGCATCAGGCGCAGGGACATGAAGTGGTGCTGGTGTCGGCG
TCGCTGGATCTGTATCTGCAACCGTGGTGTACCCAGCATGGGTTGTCGCTGATCTGCAATCGGCTGGAACACGCTGCAGG
TGTGCTGAGCGGGCGCTATGCCGACGGCGATTGCGGGCCGCACAAGGTCGCGCGGATTTGCAGTCAATACGACTTGCATC
GGTACGACTGCGTGCACGCCTATGGCGACAGCCGCGAAGACAAACCGATGCTCGCGCTTGCGCAACAACGCTGGTATCGC
GGGCATCTGCTGCACTGA

Upstream 100 bases:

>100_bases
GTATTGGAAACACGAACTGATGAGGGATGCGCGAACAGCACGCTCTCAAGCCCCTCTTCTGCAGGAGAGGGGTTGGGTGA
GGGTCCGGGGCGAAGCTCTG

Downstream 100 bases:

>100_bases
AATGGCCGCGACGTCCGCCCCTGCACCCGATCTGGTCGAACGCCTCGACCGCCTGCTGCCGCAGACCCAATGCGGGCAAT
GCGGGTATGACGGCTGTCGT

Product: putative phosphatase

Products: NA

Alternate protein names: Phosphoserine Phosphatase; HAD-Superfamily Subfamily IB Hydrolase; HAD-Superfamily Subfamily IB Hydrolase TIGR; HAD-Superfamily Hydrolase; Phosphatase; Hydrolase

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHTITTCDSYGRFLRKVATPAQV
AAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDEMDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSA
SLDLYLQPWCTQHGLSLICNRLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR
GHLLH

Sequences:

>Translated_245_residues
MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHTITTCDSYGRFLRKVATPAQV
AAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDEMDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSA
SLDLYLQPWCTQHGLSLICNRLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR
GHLLH
>Mature_245_residues
MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHTITTCDSYGRFLRKVATPAQV
AAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDEMDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSA
SLDLYLQPWCTQHGLSLICNRLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR
GHLLH

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27274; Mature: 27274

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHT
CEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
ITTCDSYGRFLRKVATPAQVAAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSASLDLYLQPWCTQHGLSLICN
HHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCHHHHHHHHHHHH
RLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
GHLLH
CCCCC
>Mature Secondary Structure
MWLSLHVASLVPSPAPAGHLLPHEGGQCPGGRRDIRHGFNQLQSTIHAPMHLALFDFDHT
CEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH
ITTCDSYGRFLRKVATPAQVAAARWQAGPWVLGFRMGVVSAAALRARVTRLVFSGRSLDE
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
MDAHGAEYARTALPGMLRGEMMQRIDWHQAQGHEVVLVSASLDLYLQPWCTQHGLSLICN
HHHCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCHHHHHHHHHHHH
RLEHAAGVLSGRYADGDCGPHKVARICSQYDLHRYDCVHAYGDSREDKPMLALAQQRWYR
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHHHHHHHHHHHH
GHLLH
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA