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The map label for this gene is bphP [H]

Identifier: 78046885

GI number: 78046885

Start: 1492746

End: 1493876

Strand: Reverse

Name: bphP [H]

Synonym: XCV1329

Alternate gene names: 78046885

Gene position: 1493876-1492746 (Counterclockwise)

Preceding gene: 78046886

Following gene: 78046884

Centisome position: 28.85

GC content: 63.75

Gene sequence:

>1131_bases
ATGAACCTCACCGCGACCGGCCTGGCTGCAAGCAGCGACGACACCGAATCGACCAAGATCCTGATCGTGGACGATGTGCC
GCAGAACCTGGTGGCCATGGAAGCGCTGCTGCAACGCGACGGCATCCGCGTGCTATGCGCCGCCTCCGGTGCGCAGGCGC
TGGAACTGCTGCTCGAACACGACGTGGCATTGGCGCTGCTGGACGTGCACATGCCGCAAATGGACGGTTTTTCGCTGGCG
GAATTGATGCGCGGTTCGCAGCGCACCCGGCATGTGCCGATCATTTTCCTGACCGCCTCGCCAAACGATCCGATGCGCGC
TTTCCAGGGTTATGAAACCGGCGCCGTGGATTTTCTGCACAAGCCGATCGAGCCGCACGTGATCTTGAGCAAGGTCAACG
TGTTCATCGAGTTGTACCAGCAGCGGCGGCTGCTCAAGGCGAGAAATGCCTCGCTCGAACGCGCGCTCACGCTCAACGAA
ACCATGATGGCCGTGCTCACTCACGACCTGCGCACGCCGCTGTCGGTGATCCTGCTGTGCGCCGACAAACTCGGCCTGGA
TGTCGATGCCGACAGTTCGGCGGCGCGCACGCTGGAACACCTGGAAAACAGCGCGCACCGCATGTCGCGCATGGTCGAGC
AATTGCTGGATTTTTCGCGCCTGCGCACCGATGGTTTGCCGATGCAGTTCGGCCCATGCAACCTGGGCGAGGTGGTGCAC
AGCGTGGTGGGCGAAGTGGCGCAGGCCAATCCACACACTACGATCGACCTGCGCACCGAGGGCGATCTGGATGGCGATGG
GGATGGCGACCGGTTGGCGCAGGTCGTGTCCAATCTGGTCGGCAACGCCGTCCTGCATGGCGGACGCCATCCGGTGCAGG
TGCATCTGGATGGACGCGAACACGACACCCTGCGCCTGTCGGTGCGCAACGCCGGCAGCATCCCCGACAGCCTGATGCCG
CGCCTGTTCGAACCGTTCAAGGCCAGCTTCCATGCCAGCCAAGGACTGGGACTGGGCCTGTTCATCGCCGACCAGTTCGT
CAAGGCACACGGCGGCACGCTGCAGGCGCGCAACGAGGACGGCGATGTGGTCTTCGAAGCACGACTGCGCCGCCACAACC
TGGCAGCCTGA

Upstream 100 bases:

>100_bases
CCGCCGCCTCGTTGATGCCCGCCTCCGCTCTCGCCCACGCCGGCGCCGATGCGGTGCTGACCTTGCAAGCCATCTGCACC
CGACTGGAAGCTTTTCACGC

Downstream 100 bases:

>100_bases
CCGCCGCACGTTCCCGGCGGCTGCAGTGCCGAGGCGCGCGCAGGTGTGCGACCAGCGCATCTTGGCCGATGGATTGCCGC
GGCCTCCAGCAAGAGGGGCC

Product: putative two-component system regulatory protein

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MNLTATGLAASSDDTESTKILIVDDVPQNLVAMEALLQRDGIRVLCAASGAQALELLLEHDVALALLDVHMPQMDGFSLA
ELMRGSQRTRHVPIIFLTASPNDPMRAFQGYETGAVDFLHKPIEPHVILSKVNVFIELYQQRRLLKARNASLERALTLNE
TMMAVLTHDLRTPLSVILLCADKLGLDVDADSSAARTLEHLENSAHRMSRMVEQLLDFSRLRTDGLPMQFGPCNLGEVVH
SVVGEVAQANPHTTIDLRTEGDLDGDGDGDRLAQVVSNLVGNAVLHGGRHPVQVHLDGREHDTLRLSVRNAGSIPDSLMP
RLFEPFKASFHASQGLGLGLFIADQFVKAHGGTLQARNEDGDVVFEARLRRHNLAA

Sequences:

>Translated_376_residues
MNLTATGLAASSDDTESTKILIVDDVPQNLVAMEALLQRDGIRVLCAASGAQALELLLEHDVALALLDVHMPQMDGFSLA
ELMRGSQRTRHVPIIFLTASPNDPMRAFQGYETGAVDFLHKPIEPHVILSKVNVFIELYQQRRLLKARNASLERALTLNE
TMMAVLTHDLRTPLSVILLCADKLGLDVDADSSAARTLEHLENSAHRMSRMVEQLLDFSRLRTDGLPMQFGPCNLGEVVH
SVVGEVAQANPHTTIDLRTEGDLDGDGDGDRLAQVVSNLVGNAVLHGGRHPVQVHLDGREHDTLRLSVRNAGSIPDSLMP
RLFEPFKASFHASQGLGLGLFIADQFVKAHGGTLQARNEDGDVVFEARLRRHNLAA
>Mature_376_residues
MNLTATGLAASSDDTESTKILIVDDVPQNLVAMEALLQRDGIRVLCAASGAQALELLLEHDVALALLDVHMPQMDGFSLA
ELMRGSQRTRHVPIIFLTASPNDPMRAFQGYETGAVDFLHKPIEPHVILSKVNVFIELYQQRRLLKARNASLERALTLNE
TMMAVLTHDLRTPLSVILLCADKLGLDVDADSSAARTLEHLENSAHRMSRMVEQLLDFSRLRTDGLPMQFGPCNLGEVVH
SVVGEVAQANPHTTIDLRTEGDLDGDGDGDRLAQVVSNLVGNAVLHGGRHPVQVHLDGREHDTLRLSVRNAGSIPDSLMP
RLFEPFKASFHASQGLGLGLFIADQFVKAHGGTLQARNEDGDVVFEARLRRHNLAA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=31.7596566523605, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI145693157, Length=234, Percent_Identity=28.6324786324786, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789149, Length=213, Percent_Identity=26.7605633802817, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1790436, Length=245, Percent_Identity=26.9387755102041, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI87082128, Length=221, Percent_Identity=29.8642533936652, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 41073; Mature: 41073

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTATGLAASSDDTESTKILIVDDVPQNLVAMEALLQRDGIRVLCAASGAQALELLLEH
CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
DVALALLDVHMPQMDGFSLAELMRGSQRTRHVPIIFLTASPNDPMRAFQGYETGAVDFLH
HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHH
KPIEPHVILSKVNVFIELYQQRRLLKARNASLERALTLNETMMAVLTHDLRTPLSVILLC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKLGLDVDADSSAARTLEHLENSAHRMSRMVEQLLDFSRLRTDGLPMQFGPCNLGEVVH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
SVVGEVAQANPHTTIDLRTEGDLDGDGDGDRLAQVVSNLVGNAVLHGGRHPVQVHLDGRE
HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
HDTLRLSVRNAGSIPDSLMPRLFEPFKASFHASQGLGLGLFIADQFVKAHGGTLQARNED
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCEEEECCCC
GDVVFEARLRRHNLAA
CCEEEEEHHHHCCCCC
>Mature Secondary Structure
MNLTATGLAASSDDTESTKILIVDDVPQNLVAMEALLQRDGIRVLCAASGAQALELLLEH
CCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
DVALALLDVHMPQMDGFSLAELMRGSQRTRHVPIIFLTASPNDPMRAFQGYETGAVDFLH
HHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCHHHHH
KPIEPHVILSKVNVFIELYQQRRLLKARNASLERALTLNETMMAVLTHDLRTPLSVILLC
CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADKLGLDVDADSSAARTLEHLENSAHRMSRMVEQLLDFSRLRTDGLPMQFGPCNLGEVVH
HHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
SVVGEVAQANPHTTIDLRTEGDLDGDGDGDRLAQVVSNLVGNAVLHGGRHPVQVHLDGRE
HHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCC
HDTLRLSVRNAGSIPDSLMPRLFEPFKASFHASQGLGLGLFIADQFVKAHGGTLQARNED
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCCEEEECCCC
GDVVFEARLRRHNLAA
CCEEEEEHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]