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The map label for this gene is ybaA [H]

Identifier: 78046884

GI number: 78046884

Start: 1492017

End: 1492514

Strand: Reverse

Name: ybaA [H]

Synonym: XCV1328

Alternate gene names: 78046884

Gene position: 1492514-1492017 (Counterclockwise)

Preceding gene: 78046885

Following gene: 78046883

Centisome position: 28.82

GC content: 61.24

Gene sequence:

>498_bases
ATGCGCCGTATGCTCGTGCGGCCAGCGCGCTGGACGCACGCTCCTGCCCCACTGCTCTCCAGTTCTTGGTCGTACGAACA
TCCCTTGGTCATCCTCGGGTGCACACCGTGCACCCCGTCTGCGGAGGTGGTTATGTCGTATATCGATGGTTTTGTGCTTG
CCGTCCCCACGGCCAACAAAGAAGCATTCATCGCGCATGCCCGCATGGGCGATGCGGTCATCATGGAATACGGTGCGCTG
CGTGTAGTGGAGTGTTGGGGCGACGATGTCCAGCCGGGGCAATGGACCGATTTCTATCGCGCCGTGGATGCCACCGCCGA
AGAGACCGTGGTGTTTTCCTGGATCGAATGGCCGGACAAGGCCACCCGCGATGAGGGCATGCGCAAGATGATGGAAGACC
CACGCATGGACCCGTCAGTCAATCCGATGCCATTCGATGGCAAGCGCATGGTCTACGGTGGCTTCGTGCCGATCGTGGCG
CTGGGCCAATCGGCGTGA

Upstream 100 bases:

>100_bases
AGATCCGCTGCCGCCGTGTCAGCGAGCCCGACAGCCAGCGCCTTGGCAGTGCGCCAGGCGGCCCAGGTGACAGCCAACTC
AAGCAGTGCCGTTGCACCCC

Downstream 100 bases:

>100_bases
GCGATGTGGGGCGTGGCGGCCCGCAGGAGCTTGGCCAGGCATGCGCAGGCTGGTGCCGCCGCTGGCATTGGGCACGGAAT
CGCTGGTGGTGATCGCTACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MRRMLVRPARWTHAPAPLLSSSWSYEHPLVILGCTPCTPSAEVVMSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGAL
RVVECWGDDVQPGQWTDFYRAVDATAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVA
LGQSA

Sequences:

>Translated_165_residues
MRRMLVRPARWTHAPAPLLSSSWSYEHPLVILGCTPCTPSAEVVMSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGAL
RVVECWGDDVQPGQWTDFYRAVDATAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVA
LGQSA
>Mature_165_residues
MRRMLVRPARWTHAPAPLLSSSWSYEHPLVILGCTPCTPSAEVVMSYIDGFVLAVPTANKEAFIAHARMGDAVIMEYGAL
RVVECWGDDVQPGQWTDFYRAVDATAEETVVFSWIEWPDKATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVA
LGQSA

Specific function: Unknown

COG id: COG5507

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786661, Length=115, Percent_Identity=53.9130434782609, Blast_Score=128, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009874 [H]

Pfam domain/function: PF07237 DUF1428 [H]

EC number: NA

Molecular weight: Translated: 18456; Mature: 18456

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRMLVRPARWTHAPAPLLSSSWSYEHPLVILGCTPCTPSAEVVMSYIDGFVLAVPTANK
CCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCC
EAFIAHARMGDAVIMEYGALRVVECWGDDVQPGQWTDFYRAVDATAEETVVFSWIEWPDK
CEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCC
ATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQSA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCC
>Mature Secondary Structure
MRRMLVRPARWTHAPAPLLSSSWSYEHPLVILGCTPCTPSAEVVMSYIDGFVLAVPTANK
CCCCCCCCCCCCCCCCCHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCC
EAFIAHARMGDAVIMEYGALRVVECWGDDVQPGQWTDFYRAVDATAEETVVFSWIEWPDK
CEEEEECCCCCCEEEECCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCC
ATRDEGMRKMMEDPRMDPSVNPMPFDGKRMVYGGFVPIVALGQSA
CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]