Click here to switch to the map view.

The map label for this gene is 78046833

Identifier: 78046833

GI number: 78046833

Start: 1434544

End: 1435056

Strand: Reverse

Name: 78046833

Synonym: XCV1277

Alternate gene names: NA

Gene position: 1435056-1434544 (Counterclockwise)

Preceding gene: 78046834

Following gene: 78046832

Centisome position: 27.71

GC content: 66.08

Gene sequence:

>513_bases
ATGCGCAAGATCTTCAGCAGTCAACGTATCGAAACCGCCGAAGGCGTGGCCAATCTGTTGCGCGATGCGGGAATCGAGAT
CCGCATCAGCAACGGTCGCTCTTATCAGAGCAAGCGCGGCGGCCAGTTCAGCTACCTGGAGCAGAGCAACGCCCAGGCGC
AGCCCACCGTCTGGATCGTGCATGCCAACGACCAACCGCGCGCACGCGAGCTGTTGCGCGACGCCCGCCTGCTGGACACC
ACCCGCCGCGACCTGCCGAATGTGGAATACACCTTCCGCGACGGCGAAAACGGCTCCAGCTCCAGTGCGCGCAGCTGGGC
CTGGCGTATCCGCCTGGTGTTGCTGCTGGTGATCGGCGCCGTGGCGATGGTGGTGGTGATGCGCCATCGCAGCGCGCCGA
CGCAACTGGCACCAGCAGCCCAGCCGGCATCGCAACGGACGCCGACGCCAGATGGCGCACCACCGGCAGCAGAAGACGAC
GAAGTGCGCGTACGGATCCAGCCGACCCGCTGA

Upstream 100 bases:

>100_bases
GCATGCGATCACCTGACCACACCACCCGCACCTTGATGTTTCATCTTGAACTGGCGCCTCAACGGTGCCATCTGTTCCGG
ACCCAACGGCGTTTTCCACC

Downstream 100 bases:

>100_bases
ATGCAACTGGCCAGCGTGGCCATCCGCTGGTACGACAAGCATGCTCGTCGGCGCGGTCACATCCGTTGCCGGCCTGCGTC
ATGCTGGCACCAGGACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MRKIFSSQRIETAEGVANLLRDAGIEIRISNGRSYQSKRGGQFSYLEQSNAQAQPTVWIVHANDQPRARELLRDARLLDT
TRRDLPNVEYTFRDGENGSSSSARSWAWRIRLVLLLVIGAVAMVVVMRHRSAPTQLAPAAQPASQRTPTPDGAPPAAEDD
EVRVRIQPTR

Sequences:

>Translated_170_residues
MRKIFSSQRIETAEGVANLLRDAGIEIRISNGRSYQSKRGGQFSYLEQSNAQAQPTVWIVHANDQPRARELLRDARLLDT
TRRDLPNVEYTFRDGENGSSSSARSWAWRIRLVLLLVIGAVAMVVVMRHRSAPTQLAPAAQPASQRTPTPDGAPPAAEDD
EVRVRIQPTR
>Mature_170_residues
MRKIFSSQRIETAEGVANLLRDAGIEIRISNGRSYQSKRGGQFSYLEQSNAQAQPTVWIVHANDQPRARELLRDARLLDT
TRRDLPNVEYTFRDGENGSSSSARSWAWRIRLVLLLVIGAVAMVVVMRHRSAPTQLAPAAQPASQRTPTPDGAPPAAEDD
EVRVRIQPTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18972; Mature: 18972

Theoretical pI: Translated: 11.13; Mature: 11.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIFSSQRIETAEGVANLLRDAGIEIRISNGRSYQSKRGGQFSYLEQSNAQAQPTVWIV
CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHCCCCCEEECCCCCCCCCCEEEEE
HANDQPRARELLRDARLLDTTRRDLPNVEYTFRDGENGSSSSARSWAWRIRLVLLLVIGA
ECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
VAMVVVMRHRSAPTQLAPAAQPASQRTPTPDGAPPAAEDDEVRVRIQPTR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC
>Mature Secondary Structure
MRKIFSSQRIETAEGVANLLRDAGIEIRISNGRSYQSKRGGQFSYLEQSNAQAQPTVWIV
CCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCHHCCCCCEEECCCCCCCCCCEEEEE
HANDQPRARELLRDARLLDTTRRDLPNVEYTFRDGENGSSSSARSWAWRIRLVLLLVIGA
ECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
VAMVVVMRHRSAPTQLAPAAQPASQRTPTPDGAPPAAEDDEVRVRIQPTR
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA