| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046831
Identifier: 78046831
GI number: 78046831
Start: 1432496
End: 1432981
Strand: Reverse
Name: 78046831
Synonym: XCV1275
Alternate gene names: NA
Gene position: 1432981-1432496 (Counterclockwise)
Preceding gene: 78046832
Following gene: 162138541
Centisome position: 27.67
GC content: 56.17
Gene sequence:
>486_bases GTGAAGGCAAGCCTGTTCACCAGTCTGCTGATGATGGTCAGCATGAGCGCGCATGCGGACGGACTCACCAAGTCCCCCGA TGGCAAGACGCTATCGGTGAGTTTCGGAGCACCCACCTTCAAGCAGGTGCTTCACTATCGCAAGCTCTACGACAAGAAGC CCTTCCCCGATGCGGAAATCTATTATTTCAGCAACGGCATGTACAAGATCATTTCCCAGGGCGAAAACCATTACGGCGTT TATGTCCTGCAGGGAACGTTCGACGACCAGAGCTACACCATCCGGTTCATTTCCCTGCCCTCGGAAGACTGGGGCAACAA GACCGCGTTCCATCAGCTGACCTTCGTGCGCGGCGACAAGCAGAATGTCTTTATCCAGAACGCCATCGTCGACACCGGCG AAGCGATCGCGCAGCAGAACGGCACCTACACGCTGGAGAAGAACACCGTCTCCAATCCGGTTCCCACGTCCTGGAAGCAC GACTGA
Upstream 100 bases:
>100_bases TGATCCGAAGTGATGGGTTCGTATCCGACTGTCGCCGTCATCGGGCAGCGCCCGCGCTGCTATAAGCAGGCAGGATTCAA CAAGACTACGGAGTCATGAA
Downstream 100 bases:
>100_bases GCGTTGTAGCCGCGCTCAGCATCTGCCCAAACGCAAGCGCCCTCCCGCCAGGCGGAAGGGCGCGGTCGATCGGCGCCTTG TTACGTACTGCAAATCGCGG
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKASLFTSLLMMVSMSAHADGLTKSPDGKTLSVSFGAPTFKQVLHYRKLYDKKPFPDAEIYYFSNGMYKIISQGENHYGV YVLQGTFDDQSYTIRFISLPSEDWGNKTAFHQLTFVRGDKQNVFIQNAIVDTGEAIAQQNGTYTLEKNTVSNPVPTSWKH D
Sequences:
>Translated_161_residues MKASLFTSLLMMVSMSAHADGLTKSPDGKTLSVSFGAPTFKQVLHYRKLYDKKPFPDAEIYYFSNGMYKIISQGENHYGV YVLQGTFDDQSYTIRFISLPSEDWGNKTAFHQLTFVRGDKQNVFIQNAIVDTGEAIAQQNGTYTLEKNTVSNPVPTSWKH D >Mature_161_residues MKASLFTSLLMMVSMSAHADGLTKSPDGKTLSVSFGAPTFKQVLHYRKLYDKKPFPDAEIYYFSNGMYKIISQGENHYGV YVLQGTFDDQSYTIRFISLPSEDWGNKTAFHQLTFVRGDKQNVFIQNAIVDTGEAIAQQNGTYTLEKNTVSNPVPTSWKH D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18164; Mature: 18164
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASLFTSLLMMVSMSAHADGLTKSPDGKTLSVSFGAPTFKQVLHYRKLYDKKPFPDAEI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCEE YYFSNGMYKIISQGENHYGVYVLQGTFDDQSYTIRFISLPSEDWGNKTAFHQLTFVRGDK EEEECCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEECCC QNVFIQNAIVDTGEAIAQQNGTYTLEKNTVSNPVPTSWKHD CCEEEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MKASLFTSLLMMVSMSAHADGLTKSPDGKTLSVSFGAPTFKQVLHYRKLYDKKPFPDAEI CCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCEE YYFSNGMYKIISQGENHYGVYVLQGTFDDQSYTIRFISLPSEDWGNKTAFHQLTFVRGDK EEEECCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCCCEEEEEEEEECCC QNVFIQNAIVDTGEAIAQQNGTYTLEKNTVSNPVPTSWKHD CCEEEEEEECCCCHHHHHCCCCEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA