| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78046807
Identifier: 78046807
GI number: 78046807
Start: 1410853
End: 1411617
Strand: Reverse
Name: 78046807
Synonym: XCV1251
Alternate gene names: NA
Gene position: 1411617-1410853 (Counterclockwise)
Preceding gene: 78046808
Following gene: 78046806
Centisome position: 27.26
GC content: 64.58
Gene sequence:
>765_bases ATGACAACGCTTCCCATCCGTGCGCCGACCGTGGCGCATACCGCCAGCGGCGTGGAGACGCACTTCCTCGTGCGCCATCT GTGGCTGCCCCTGGCCTGCGTCCTGTTGGCGAGCGCGCTGCTGATGGGCGCCGGTGGCGACCAATGGATCGCCGATGCGC TGTATCGGTTGGAAGGCGGCCACTGGTTACTCAAGGACCACTGGTTCACCAGCGGCGTGATCCACCGCGTGGGTAAATGG TTGAGCACGGCAGCCGGAGTCGGCGTGCTGGTGCTGGCCATCGTTGCGTGGTGCAGGCCGCGCCTGAAGGTGTTGCGCTG GCCGCTGACCTACCTGGCCGCCTCCGTCGCGCTGTCGACCTCGCTGGTGTCGCTGCTCAAGTCGTGGACGGCGATGGATT GCCCATGGGATCTGAGCCGCTATGGCGGTACGCAGGCGATGATCGGGCTATTCGAATCGCGCCACGGCATCGCCGCGTCC GGGTGCTTTCCTGCCGGCCATGCCAGTGCCGGTTATGCCTGGGTGGCACTGTATTTTTGTGCGCTGGCGCTCCGTCCTGC ATGGCGGTTTGCAGGTTTGTTCATAGGCTTGGCAGCAGGTCTCATTTTCGGTGTTGCGCAACAATTGCGCGGCGCGCATT TTCTCTCGCACGACCTGTGGTCGCTGGCGGTGTGCTGGGTGAGCGCACTGGCGCTGTACTGCGTGATGCTGCAACGGCCG CGTCGCGCGCTTGGATTGATGTTGCTCTCGGGGGATGCAGCATGA
Upstream 100 bases:
>100_bases AACGCTTGGTGTCGGGTTAACGGCCGGGCAACCCCGGTCCGACCGCTTTCCGACATCCGGGTTTCGAAGATGTCGGGCAT TGACACAGGCCGCCATCTCG
Downstream 100 bases:
>100_bases GTACCTGGTTGCCGGAACCGCGCAGGCGTGGTGGCCTGCGCGCGCTGACGTGGAGTACGCGGCCGACGGTGTCGACCGAA GCGTTGGTACTGCTGTCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: PAP2 Family Protein; Phosphoesterase PA-Phosphatase ; Phosphoesterase; Transmembrane Protein; PAP2 Superfamily Protein-Like Protein; PAP2 Superfamily; Pap2 Superfamily Protein-Like Protein; Phosphoesterase PA-Phosphatase-Like; Phosphoesterase PA-Phosphatase Related Protein; PAP2 Superfamily Membrane Protein
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MTTLPIRAPTVAHTASGVETHFLVRHLWLPLACVLLASALLMGAGGDQWIADALYRLEGGHWLLKDHWFTSGVIHRVGKW LSTAAGVGVLVLAIVAWCRPRLKVLRWPLTYLAASVALSTSLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAAS GCFPAGHASAGYAWVALYFCALALRPAWRFAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQRP RRALGLMLLSGDAA
Sequences:
>Translated_254_residues MTTLPIRAPTVAHTASGVETHFLVRHLWLPLACVLLASALLMGAGGDQWIADALYRLEGGHWLLKDHWFTSGVIHRVGKW LSTAAGVGVLVLAIVAWCRPRLKVLRWPLTYLAASVALSTSLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAAS GCFPAGHASAGYAWVALYFCALALRPAWRFAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQRP RRALGLMLLSGDAA >Mature_253_residues TTLPIRAPTVAHTASGVETHFLVRHLWLPLACVLLASALLMGAGGDQWIADALYRLEGGHWLLKDHWFTSGVIHRVGKWL STAAGVGVLVLAIVAWCRPRLKVLRWPLTYLAASVALSTSLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAASG CFPAGHASAGYAWVALYFCALALRPAWRFAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQRPR RALGLMLLSGDAA
Specific function: Unknown
COG id: COG3907
COG function: function code R; PAP2 (acid phosphatase) superfamily protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27476; Mature: 27345
Theoretical pI: Translated: 9.58; Mature: 9.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLPIRAPTVAHTASGVETHFLVRHLWLPLACVLLASALLMGAGGDQWIADALYRLEGG CCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC HWLLKDHWFTSGVIHRVGKWLSTAAGVGVLVLAIVAWCRPRLKVLRWPLTYLAASVALST EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAASGCFPAGHASAGYAWVALYFC HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH ALALRPAWRFAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRALGLMLLSGDAA HHHHHHHHCCCCCC >Mature Secondary Structure TTLPIRAPTVAHTASGVETHFLVRHLWLPLACVLLASALLMGAGGDQWIADALYRLEGG CCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC HWLLKDHWFTSGVIHRVGKWLSTAAGVGVLVLAIVAWCRPRLKVLRWPLTYLAASVALST EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLVSLLKSWTAMDCPWDLSRYGGTQAMIGLFESRHGIAASGCFPAGHASAGYAWVALYFC HHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH ALALRPAWRFAGLFIGLAAGLIFGVAQQLRGAHFLSHDLWSLAVCWVSALALYCVMLQRP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RRALGLMLLSGDAA HHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA