| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is eptA [H]
Identifier: 78046806
GI number: 78046806
Start: 1409189
End: 1410856
Strand: Reverse
Name: eptA [H]
Synonym: XCV1250
Alternate gene names: 78046806
Gene position: 1410856-1409189 (Counterclockwise)
Preceding gene: 78046807
Following gene: 78046805
Centisome position: 27.24
GC content: 62.89
Gene sequence:
>1668_bases ATGAGTACCTGGTTGCCGGAACCGCGCAGGCGTGGTGGCCTGCGCGCGCTGACGTGGAGTACGCGGCCGACGGTGTCGAC CGAAGCGTTGGTACTGCTGTCGAGCCTGTTTTTTGCGTTGGTGTGCAATCAGTTGTTCTGGCGCACGGCCATGGCCACGC ATCCGGGCAGCATCGGGTTCGCGATCTCGTTGATGGCGCTGTTGGTGGCCGTGCATGCGCTGCTCCTGGGCATCCTGGTT TGGCGCTGGAATGCAAAGCCGCTGCTGACGCTCTTGCTGTTCACCACCGCGCTGGCCGCGCATTACATGGACAGCTACAA CGTCTATCTGGATGCGGACATGCTGCGCAACGTGCTGCATACCGATCACAAGGAATCGCGCGAGTTGCTCACGCCGGGCC TGATCCTTCCGCTGGTGTGCTACTTCCTGATTCCGACTGCATTGCTGTGGCGCACACGTTTGCGCGCACGCAGTGCGGGC AAGGCGGTGCTGGTGCGATCGGGCTTCCTGCTGGTGGTGGCGGTGGTGGGCGCTGCTGGCGCCATGCTCTCGTCGCAGGA TATTTCCGCACTGATGCGCAATCACCGCGAAGCGCGTTATTTGGCCACGCCGATCAATTACATCGTGGCATTGCGGCAAA ACCTCAAATCCGAATCGCCGATCAAGCGTGCTCCCAAACAGCCGATCGAACACGACGCCATGGCCACGCCGCGCGCGCCG GGCAGCCGCCCGCGCTTGTTGCTGGTGGTGCTGGGGGAAACCGCACGCGCGCAGAACTGGGGACTCAACGGCTATGCCAG ACAGACCACGCCGGAGCTGGCACAGGCAGGGGTGATCAACTTCCCCGACATGCATTCGTGCGGGACCAGCACCGAAGTCT CGGTGCCCTGCATGTTCTCGCCCTACGGGCGTCGCGACTACAACGAAGACATGATTCGTGGCCATCAGTCGTTCCTGCAT GTGCTGGAACATGCCGGCATTTCGACGCTGTGGCGCGACAATCAGTCCGGCTGCAAGGGCGTGTGCGACGGGTTGGAGAT CCAGAAGCTGGACGATGCCACCACACCGGGCCTGTGCGCCGATGGCCGCTGCATGGACGAGATCCTGTTGAGCGACCTGG CTGCGCAGGTGCGCGCAAAGCCTGGCGACCGCGTGGTGGTGCTGCACCAACTGGGCAGCCATGGCCCGAGCTACTTCGAA CGGTACCCGGCGCAGTTCGAACGCTTCAAGCCGGTGTGCAAGACCGCGGATCTGGGCAGCTGCGGCCGCCAGGACATCGT CAACGCCTACGATAATTCGATCCTGTACACCGACCATTTCCTCAATCAGGCCATCCACGCGCTGCGTGGCCTGCCGGACT ACGACACGGCGATGATCTATCTCTCCGATCACGGCGAATCGCTTGGCGAAAAAGGCCTGTACCTGCATGGCGTTCCGTAT GCCATCGCGCCCAAGGAGCAGACCCATGTGCCGATGGTGATGTGGTTCTCGCCTGAGTTCGCGCGCGATCGCGGCCTGGA TGAAGCCTGCCTGCGCCACCGTGCAGGGCAATATACCGATCAGGATGCGCTGTTCCCGTCCGTGCTTGGGTTGATGCAGG TCAAGACCAGCGTCTATGCGCCCGAGCGCGACCTGTTCGCCAAGTGCACCGGCACCACGCTGCGCTGA
Upstream 100 bases:
>100_bases CGCTGGCGGTGTGCTGGGTGAGCGCACTGGCGCTGTACTGCGTGATGCTGCAACGGCCGCGTCGCGCGCTTGGATTGATG TTGCTCTCGGGGGATGCAGC
Downstream 100 bases:
>100_bases TCGCCAACGCCTGCGTCTGCCCGCGCCGCACATCGCATGCGTGGCGTGCGTTGCCCCTTGCCCTGAACCCCGGCGCGCTC TAGCCTTCGCCGGACTTCAC
Product: putative membrane-associated hydrolase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MSTWLPEPRRRGGLRALTWSTRPTVSTEALVLLSSLFFALVCNQLFWRTAMATHPGSIGFAISLMALLVAVHALLLGILV WRWNAKPLLTLLLFTTALAAHYMDSYNVYLDADMLRNVLHTDHKESRELLTPGLILPLVCYFLIPTALLWRTRLRARSAG KAVLVRSGFLLVVAVVGAAGAMLSSQDISALMRNHREARYLATPINYIVALRQNLKSESPIKRAPKQPIEHDAMATPRAP GSRPRLLLVVLGETARAQNWGLNGYARQTTPELAQAGVINFPDMHSCGTSTEVSVPCMFSPYGRRDYNEDMIRGHQSFLH VLEHAGISTLWRDNQSGCKGVCDGLEIQKLDDATTPGLCADGRCMDEILLSDLAAQVRAKPGDRVVVLHQLGSHGPSYFE RYPAQFERFKPVCKTADLGSCGRQDIVNAYDNSILYTDHFLNQAIHALRGLPDYDTAMIYLSDHGESLGEKGLYLHGVPY AIAPKEQTHVPMVMWFSPEFARDRGLDEACLRHRAGQYTDQDALFPSVLGLMQVKTSVYAPERDLFAKCTGTTLR
Sequences:
>Translated_555_residues MSTWLPEPRRRGGLRALTWSTRPTVSTEALVLLSSLFFALVCNQLFWRTAMATHPGSIGFAISLMALLVAVHALLLGILV WRWNAKPLLTLLLFTTALAAHYMDSYNVYLDADMLRNVLHTDHKESRELLTPGLILPLVCYFLIPTALLWRTRLRARSAG KAVLVRSGFLLVVAVVGAAGAMLSSQDISALMRNHREARYLATPINYIVALRQNLKSESPIKRAPKQPIEHDAMATPRAP GSRPRLLLVVLGETARAQNWGLNGYARQTTPELAQAGVINFPDMHSCGTSTEVSVPCMFSPYGRRDYNEDMIRGHQSFLH VLEHAGISTLWRDNQSGCKGVCDGLEIQKLDDATTPGLCADGRCMDEILLSDLAAQVRAKPGDRVVVLHQLGSHGPSYFE RYPAQFERFKPVCKTADLGSCGRQDIVNAYDNSILYTDHFLNQAIHALRGLPDYDTAMIYLSDHGESLGEKGLYLHGVPY AIAPKEQTHVPMVMWFSPEFARDRGLDEACLRHRAGQYTDQDALFPSVLGLMQVKTSVYAPERDLFAKCTGTTLR >Mature_554_residues STWLPEPRRRGGLRALTWSTRPTVSTEALVLLSSLFFALVCNQLFWRTAMATHPGSIGFAISLMALLVAVHALLLGILVW RWNAKPLLTLLLFTTALAAHYMDSYNVYLDADMLRNVLHTDHKESRELLTPGLILPLVCYFLIPTALLWRTRLRARSAGK AVLVRSGFLLVVAVVGAAGAMLSSQDISALMRNHREARYLATPINYIVALRQNLKSESPIKRAPKQPIEHDAMATPRAPG SRPRLLLVVLGETARAQNWGLNGYARQTTPELAQAGVINFPDMHSCGTSTEVSVPCMFSPYGRRDYNEDMIRGHQSFLHV LEHAGISTLWRDNQSGCKGVCDGLEIQKLDDATTPGLCADGRCMDEILLSDLAAQVRAKPGDRVVVLHQLGSHGPSYFER YPAQFERFKPVCKTADLGSCGRQDIVNAYDNSILYTDHFLNQAIHALRGLPDYDTAMIYLSDHGESLGEKGLYLHGVPYA IAPKEQTHVPMVMWFSPEFARDRGLDEACLRHRAGQYTDQDALFPSVLGLMQVKTSVYAPERDLFAKCTGTTLR
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=537, Percent_Identity=36.3128491620112, Blast_Score=360, Evalue=1e-100, Organism=Escherichia coli, GI87082286, Length=450, Percent_Identity=30, Blast_Score=162, Evalue=4e-41, Organism=Escherichia coli, GI87082223, Length=399, Percent_Identity=26.8170426065163, Blast_Score=89, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61642; Mature: 61511
Theoretical pI: Translated: 8.30; Mature: 8.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTWLPEPRRRGGLRALTWSTRPTVSTEALVLLSSLFFALVCNQLFWRTAMATHPGSIGF CCCCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AISLMALLVAVHALLLGILVWRWNAKPLLTLLLFTTALAAHYMDSYNVYLDADMLRNVLH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHH TDHKESRELLTPGLILPLVCYFLIPTALLWRTRLRARSAGKAVLVRSGFLLVVAVVGAAG CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH AMLSSQDISALMRNHREARYLATPINYIVALRQNLKSESPIKRAPKQPIEHDAMATPRAP HHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCC GSRPRLLLVVLGETARAQNWGLNGYARQTTPELAQAGVINFPDMHSCGTSTEVSVPCMFS CCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEECCEEEC PYGRRDYNEDMIRGHQSFLHVLEHAGISTLWRDNQSGCKGVCDGLEIQKLDDATTPGLCA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCEEECCCCCCCCCCC DGRCMDEILLSDLAAQVRAKPGDRVVVLHQLGSHGPSYFERYPAQFERFKPVCKTADLGS CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHCCCCCCC CGRQDIVNAYDNSILYTDHFLNQAIHALRGLPDYDTAMIYLSDHGESLGEKGLYLHGVPY CCHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCE AIAPKEQTHVPMVMWFSPEFARDRGLDEACLRHRAGQYTDQDALFPSVLGLMQVKTSVYA EECCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC PERDLFAKCTGTTLR CCHHHHHHCCCCCCC >Mature Secondary Structure STWLPEPRRRGGLRALTWSTRPTVSTEALVLLSSLFFALVCNQLFWRTAMATHPGSIGF CCCCCCHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH AISLMALLVAVHALLLGILVWRWNAKPLLTLLLFTTALAAHYMDSYNVYLDADMLRNVLH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHH TDHKESRELLTPGLILPLVCYFLIPTALLWRTRLRARSAGKAVLVRSGFLLVVAVVGAAG CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHH AMLSSQDISALMRNHREARYLATPINYIVALRQNLKSESPIKRAPKQPIEHDAMATPRAP HHHCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCC GSRPRLLLVVLGETARAQNWGLNGYARQTTPELAQAGVINFPDMHSCGTSTEVSVPCMFS CCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEECCEEEC PYGRRDYNEDMIRGHQSFLHVLEHAGISTLWRDNQSGCKGVCDGLEIQKLDDATTPGLCA CCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHCCCCEEECCCCCCCCCCC DGRCMDEILLSDLAAQVRAKPGDRVVVLHQLGSHGPSYFERYPAQFERFKPVCKTADLGS CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHCHHHHHHHHHHHCCCCCCC CGRQDIVNAYDNSILYTDHFLNQAIHALRGLPDYDTAMIYLSDHGESLGEKGLYLHGVPY CCHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEEEECCCE AIAPKEQTHVPMVMWFSPEFARDRGLDEACLRHRAGQYTDQDALFPSVLGLMQVKTSVYA EECCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCC PERDLFAKCTGTTLR CCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8391535; 11677609 [H]