Click here to switch to the map view.

The map label for this gene is 78046596

Identifier: 78046596

GI number: 78046596

Start: 1167435

End: 1167803

Strand: Reverse

Name: 78046596

Synonym: XCV1040

Alternate gene names: NA

Gene position: 1167803-1167435 (Counterclockwise)

Preceding gene: 78046597

Following gene: 78046595

Centisome position: 22.55

GC content: 66.67

Gene sequence:

>369_bases
GTGGACGCGGCGCTCAATCTGGCCGACACCGACCGCTACTGGCAGCCACTGGGCGAAGTGCTGGCGCCGCAGGGCCATGT
GGGCCTGATCGTGGAGCCGCGCGGACCGTTGCCGATCGGCGACCCCTACAAATCCAAGTGCATCGGCATCCATTGGGAGC
TGATGTTCACGCGCGCGCGCTACGCGACCGAGGACATGGTCGAGCAGCACCGTATCCTCAACCGGGCAGCCAGCCTGATC
GATGCCGGCGAACTGCGCACCACGCATACCGAGACGCTGTCGCCGATCAATGCGCAGCAGCTGCGCGAGGCGCATCGTCG
GCTGGAAAGCGGCAGCACGATCGGCAAGCTGGTGCTGGCCGGCTGGTAA

Upstream 100 bases:

>100_bases
TCCTGAGAGCATCGAGTGGGTTCGCCAAATGGGTGCGCATCACGTGATCGATCATCACCAACCGCTGCAGCCGCAACTGT
AGGCGCTGGGGCTGGACACG

Downstream 100 bases:

>100_bases
GGCGGCCGGCGGGCCAAGGTCGCTGCCCCGATGCCCTGGTGCGAAAGGCGCCTGCGCATCGAAGCGCGCCTGTGCGGGCG
GCAGCACAGGCGTGGTGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MDAALNLADTDRYWQPLGEVLAPQGHVGLIVEPRGPLPIGDPYKSKCIGIHWELMFTRARYATEDMVEQHRILNRAASLI
DAGELRTTHTETLSPINAQQLREAHRRLESGSTIGKLVLAGW

Sequences:

>Translated_122_residues
MDAALNLADTDRYWQPLGEVLAPQGHVGLIVEPRGPLPIGDPYKSKCIGIHWELMFTRARYATEDMVEQHRILNRAASLI
DAGELRTTHTETLSPINAQQLREAHRRLESGSTIGKLVLAGW
>Mature_122_residues
MDAALNLADTDRYWQPLGEVLAPQGHVGLIVEPRGPLPIGDPYKSKCIGIHWELMFTRARYATEDMVEQHRILNRAASLI
DAGELRTTHTETLSPINAQQLREAHRRLESGSTIGKLVLAGW

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR014182
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 13624; Mature: 13624

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAALNLADTDRYWQPLGEVLAPQGHVGLIVEPRGPLPIGDPYKSKCIGIHWELMFTRAR
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHH
YATEDMVEQHRILNRAASLIDAGELRTTHTETLSPINAQQLREAHRRLESGSTIGKLVLA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHEEEE
GW
CC
>Mature Secondary Structure
MDAALNLADTDRYWQPLGEVLAPQGHVGLIVEPRGPLPIGDPYKSKCIGIHWELMFTRAR
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHH
YATEDMVEQHRILNRAASLIDAGELRTTHTETLSPINAQQLREAHRRLESGSTIGKLVLA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCHHHEEEE
GW
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA