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The map label for this gene is 78046528

Identifier: 78046528

GI number: 78046528

Start: 1101574

End: 1102356

Strand: Reverse

Name: 78046528

Synonym: XCV0972

Alternate gene names: NA

Gene position: 1102356-1101574 (Counterclockwise)

Preceding gene: 78046529

Following gene: 78046523

Centisome position: 21.29

GC content: 64.5

Gene sequence:

>783_bases
ATGTCGCACCTGAAACGCAAGGCCTATAAAAAGTTGCTGGCGCCGATGCAGCTGGAGCTGGTGGACATGGCGCGCTGGTT
GCGCCACACCAACCAGCGCGCCCTGGTGCTGGTGGAAGGCCGCGACACCGCCGGCAAGGGCGGCGTGATCCAGACCATCG
CCAGCCATCTCAACCCACGCCAGTGTCGCGTGGTGGCGCTGCCCAAGCCCAACGACCGCGAAAGCACGCAGTGGTATTTC
CAGCGCTATGTGACGCACCTGCCGGCGGGCGGCGAACTGGTGCTGATGGACCGCAGCTGGTACAACCGCGCCGGCGTCGA
GAAGGTGATGGGCTATTGCACCGACGCGCAATACGACCTGTTCCTGGAGCAGGCGCCACGTTTCGAACAGATGCTGGTCG
ACGACGGCATCCTGCTGTTCAAGTACTGGTTGTGCGTGGACCAGGCCGAGCAGGAAAAGCGCTTTGCCGAACGCCGCGAA
GACCCACTCAAGGGCTGGAAGCTCTCGCCGGTGGACCTGCAGTCACGCACCAAGTACGACGACTACACCGCCGCGCGCGA
ACGCATGCTGGAGGCGACGCATACGCCCGATGCACCGTGGACGCTGGTGGATTTCAACGACCAGAAGCGTGGCCGCCTGA
GCCTGATCCGCGATCTGCTGGACCGGCTACCGGACACCGCAGTGCCCGACGAGCTGGTGCAGCTGCCGCCATTGCCCGGC
AAGCTGCACAAGGAACGCTATGGCGTGCTGGAGCCGATCGACGATTACGCCGCCCAGTCCTGA

Upstream 100 bases:

>100_bases
GTGCGCAGCTGGATGCGCGCACCAGGCCCTGCAATCTGGCGACATTGCGTCCACGCCTGGGGCAATAGCCTGCGCGCTCT
CCACTGTTGCTGGAACGCGC

Downstream 100 bases:

>100_bases
GAGATTTCGTCGCTGGCCGCGGTGGCACGCGGTAGCGGGTGCAGGCCGGCCTGACGTTCGGCCTGTTCGGCCTGCAGCAC
CAGCTGGCTCAGGCGCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: URF2 [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MSHLKRKAYKKLLAPMQLELVDMARWLRHTNQRALVLVEGRDTAGKGGVIQTIASHLNPRQCRVVALPKPNDRESTQWYF
QRYVTHLPAGGELVLMDRSWYNRAGVEKVMGYCTDAQYDLFLEQAPRFEQMLVDDGILLFKYWLCVDQAEQEKRFAERRE
DPLKGWKLSPVDLQSRTKYDDYTAARERMLEATHTPDAPWTLVDFNDQKRGRLSLIRDLLDRLPDTAVPDELVQLPPLPG
KLHKERYGVLEPIDDYAAQS

Sequences:

>Translated_260_residues
MSHLKRKAYKKLLAPMQLELVDMARWLRHTNQRALVLVEGRDTAGKGGVIQTIASHLNPRQCRVVALPKPNDRESTQWYF
QRYVTHLPAGGELVLMDRSWYNRAGVEKVMGYCTDAQYDLFLEQAPRFEQMLVDDGILLFKYWLCVDQAEQEKRFAERRE
DPLKGWKLSPVDLQSRTKYDDYTAARERMLEATHTPDAPWTLVDFNDQKRGRLSLIRDLLDRLPDTAVPDELVQLPPLPG
KLHKERYGVLEPIDDYAAQS
>Mature_259_residues
SHLKRKAYKKLLAPMQLELVDMARWLRHTNQRALVLVEGRDTAGKGGVIQTIASHLNPRQCRVVALPKPNDRESTQWYFQ
RYVTHLPAGGELVLMDRSWYNRAGVEKVMGYCTDAQYDLFLEQAPRFEQMLVDDGILLFKYWLCVDQAEQEKRFAERRED
PLKGWKLSPVDLQSRTKYDDYTAARERMLEATHTPDAPWTLVDFNDQKRGRLSLIRDLLDRLPDTAVPDELVQLPPLPGK
LHKERYGVLEPIDDYAAQS

Specific function: Unknown

COG id: COG2326

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011993
- InterPro:   IPR022488 [H]

Pfam domain/function: PF03976 PPK2 [H]

EC number: NA

Molecular weight: Translated: 30195; Mature: 30064

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLKRKAYKKLLAPMQLELVDMARWLRHTNQRALVLVEGRDTAGKGGVIQTIASHLNPR
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
QCRVVALPKPNDRESTQWYFQRYVTHLPAGGELVLMDRSWYNRAGVEKVMGYCTDAQYDL
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCHHHHHHHHCCCHHHH
FLEQAPRFEQMLVDDGILLFKYWLCVDQAEQEKRFAERREDPLKGWKLSPVDLQSRTKYD
HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DYTAARERMLEATHTPDAPWTLVDFNDQKRGRLSLIRDLLDRLPDTAVPDELVQLPPLPG
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
KLHKERYGVLEPIDDYAAQS
HHHHHHCCCCCCCHHHCCCC
>Mature Secondary Structure 
SHLKRKAYKKLLAPMQLELVDMARWLRHTNQRALVLVEGRDTAGKGGVIQTIASHLNPR
CHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCC
QCRVVALPKPNDRESTQWYFQRYVTHLPAGGELVLMDRSWYNRAGVEKVMGYCTDAQYDL
CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCHHHHHHHHCCCHHHH
FLEQAPRFEQMLVDDGILLFKYWLCVDQAEQEKRFAERREDPLKGWKLSPVDLQSRTKYD
HHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
DYTAARERMLEATHTPDAPWTLVDFNDQKRGRLSLIRDLLDRLPDTAVPDELVQLPPLPG
HHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCCCCC
KLHKERYGVLEPIDDYAAQS
HHHHHHCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8199775 [H]