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The map label for this gene is ydjA [H]

Identifier: 78046505

GI number: 78046505

Start: 1076888

End: 1077463

Strand: Reverse

Name: ydjA [H]

Synonym: XCV0949

Alternate gene names: 78046505

Gene position: 1077463-1076888 (Counterclockwise)

Preceding gene: 78046508

Following gene: 78046504

Centisome position: 20.81

GC content: 70.31

Gene sequence:

>576_bases
ATGCACGCACCGTATTCGCTCCAGGCGCTGGACGCGCGCCGTTCGGTTCCCTCCAAACAACTCGGCGCGCCTGGGCCGGA
TGAAGACACCTTGCTGCGCATGCTCACCTCGGCGGTGCGCGTGCCCGACCACGGCAAGCTGGTGCCGTTCCGCTTTCTGC
GCATCAGCGGCGCCGCGCGCGCTGCGCTGGGGGATTTCCTCGCCGAGCGCACCCTGGCCGCCGACCCGCTGGCATCGCCG
GCCACCCTTGCCAAGGAACGTGGACGCTTCAGCGACGCACCGGTGGTGATCGTGGTGATCGCCTCGCTGCGCCCCGAGCA
CAAGGTGCCCGTGCAGGAACAACTGCTCACCGCCGGCTGCGTCTGTTTCGCGCTGCTGCAGGCCGCGCAGGCGCACGGCT
TCGGCGCGCAGTGGTTGAGCGCGTGGATGGCCTACGACCCGGCGGTGACGGGCTACCTGGGCCTGGAAGACAACGAACGC
ATCGCCGGCTTCATCCACATCGGCACGCCGCGCATGCAGGTGCCCGAACGCGAGCGCCCGGACCCGCGTGCCTTGCTGCG
CGACTGGACCCCGTGA

Upstream 100 bases:

>100_bases
AGGTCGATCGCGGCGGCCACGGCCCCCACGAACCATGCTGCGGCGAGCGTTGGGAAGCGGCCGTCTATAATTCAACGCCT
CGTTGCCCCGACCCGGATTT

Downstream 100 bases:

>100_bases
CCACACCGACCGACCCGCTCGACGCTGCGCCGCTGGCCATCCGGCGCCCGACCCCGCTGTATCTGGTGGATGCCAGCCTG
TACGTGTTCCGCGCCTGGCA

Product: putative nitroreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MHAPYSLQALDARRSVPSKQLGAPGPDEDTLLRMLTSAVRVPDHGKLVPFRFLRISGAARAALGDFLAERTLAADPLASP
ATLAKERGRFSDAPVVIVVIASLRPEHKVPVQEQLLTAGCVCFALLQAAQAHGFGAQWLSAWMAYDPAVTGYLGLEDNER
IAGFIHIGTPRMQVPERERPDPRALLRDWTP

Sequences:

>Translated_191_residues
MHAPYSLQALDARRSVPSKQLGAPGPDEDTLLRMLTSAVRVPDHGKLVPFRFLRISGAARAALGDFLAERTLAADPLASP
ATLAKERGRFSDAPVVIVVIASLRPEHKVPVQEQLLTAGCVCFALLQAAQAHGFGAQWLSAWMAYDPAVTGYLGLEDNER
IAGFIHIGTPRMQVPERERPDPRALLRDWTP
>Mature_191_residues
MHAPYSLQALDARRSVPSKQLGAPGPDEDTLLRMLTSAVRVPDHGKLVPFRFLRISGAARAALGDFLAERTLAADPLASP
ATLAKERGRFSDAPVVIVVIASLRPEHKVPVQEQLLTAGCVCFALLQAAQAHGFGAQWLSAWMAYDPAVTGYLGLEDNER
IAGFIHIGTPRMQVPERERPDPRALLRDWTP

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=178, Percent_Identity=33.1460674157303, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20794; Mature: 20794

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAPYSLQALDARRSVPSKQLGAPGPDEDTLLRMLTSAVRVPDHGKLVPFRFLRISGAAR
CCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEECCHHH
AALGDFLAERTLAADPLASPATLAKERGRFSDAPVVIVVIASLRPEHKVPVQEQLLTAGC
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
VCFALLQAAQAHGFGAQWLSAWMAYDPAVTGYLGLEDNERIAGFIHIGTPRMQVPERERP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCC
DPRALLRDWTP
CHHHHHCCCCC
>Mature Secondary Structure
MHAPYSLQALDARRSVPSKQLGAPGPDEDTLLRMLTSAVRVPDHGKLVPFRFLRISGAAR
CCCCCCHHHHHHHHCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHEEECCHHH
AALGDFLAERTLAADPLASPATLAKERGRFSDAPVVIVVIASLRPEHKVPVQEQLLTAGC
HHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
VCFALLQAAQAHGFGAQWLSAWMAYDPAVTGYLGLEDNERIAGFIHIGTPRMQVPERERP
HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCCCCCCC
DPRALLRDWTP
CHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]