Click here to switch to the map view.

The map label for this gene is 78046425

Identifier: 78046425

GI number: 78046425

Start: 997952

End: 1000294

Strand: Reverse

Name: 78046425

Synonym: XCV0869

Alternate gene names: NA

Gene position: 1000294-997952 (Counterclockwise)

Preceding gene: 78046426

Following gene: 78046424

Centisome position: 19.32

GC content: 63.12

Gene sequence:

>2343_bases
ATGATCCTGCGTCGATCGCGCACGCCATTCCTGCTGCCCTGCGTCCTACTTCCCTGCCTGCTCAGCTCCTGTGGCGGCGA
CGCCGCCGATGCCGGCACCGCTGCGACCCCATCGCCGGCGGCGACGGTCACCGTGAGCGCCCCGCGCGCCATGGCGCCAA
CCTCTACGCAGGCGTCCACGGCAACGGCGAGCGCCAGCACCGACCCGGCATTCCGGCGCAGCCTCGCGCCCGATAAGCCG
ATGTTCGTGATCCATGCCGACACCTGGAACGCCGCCGATCCGCAGAAGATCATCGACCTGATTCCTGCAGACCTGCGCCC
CTACACGGTTCTGCTGATCTCGCTCTCGATCAGTCACAAAGGCGCCACCGACAATCAGTGCAACTGGAACCAGGTGGCGA
ACGGGATCGAGACGGCACGCTCGTGGATCAAGACAGCTGCGGCCAACGGTGTCTGGGCGATGGTGCAACCGTCCAGCGGC
GGCTTCAGCCACTTCCCCGACTATCCCAACGGCACCGATCTGGAATCGACGGTCTACGGTGAGTTCTTCCGCGACTACCC
GAACTTCCTCGGTTTCAACTACGCCGAGCAGTTCTGGGGATTCGACGAAGCCTGCTCGGTCTCGGCAGCGCAGCGCTGGG
AGCACTGGGCCAACCTGCTCAAGCTGACCAACAAGTACGGCGGCTATCTGGCGGTGAGCTTCACCGGCGGCTTCTGGGGC
GCAAACATCAACCCGCTGGCAATGGTCAAGCGCAACGAGGCCTTACGCACCGCCCTGGGCAGCTATGCCAAGAATTTCAT
CATCCAAGAAAAGTTCACGATGAACTACGGCTACCACGACATCGAAAGCGTCAGCCTGGGCATGTTTCTGTCGGGATTTG
CGGGCCATTACGGCATCCGTCCTGACAGCAGCGGCTGGTACGCCGCCGATGGCAGCGCCTATCCTCTGGCCGCGGGCGCC
CCGCATCTGATCGAGCACCTGACGCTGACCGGCGAAACCTATTTCGATGGCCCGGAACTGATCTGGACCGATACCGTTCA
AAGCCTGCCAAACGGGACCACCGCCGACGGCTACAACACGCGGCGCTGGCAGTTCTTCCCGCAGTTCAAGAACATCCATA
TGGATGTCTACCGCAAGATTCTCGACGGCACCTTGCACATCCTCGATCGCCAGCAGGTGATCGACCGCACCAAGCTGGTA
GTGGTCGACGACACCACCAGCGGCAACGATCAGAGTCTGTATGCATCGCCGGAAACGCTGTTCTCCGGCCTGTATCTGAT
GGACGACGACGGCACCTATCTCAACCAGCACAGCTGGTACAAGAAGACCGGGCGCTACCCCGCCATCCCGACCGTATGGC
AGTTGAGCGATGACCTTTCAAAGTCCTTCCCCGTACAGGTCAAGCGCAGCGCGTACGCCACCCGCTGGCCCTCCATCGCC
GCCAAGACCCAGGAACTGAATGCCTTGTTCCCGCAGGAATCCACCGGCGATCTCTATGTGGCACGTCAAGACAACACCTG
GGTCACCTACAACCCCTACAAGACCAACAAGACTGCCAGCGGCGCGTTCAACCTGAAGTACAACAGTTGCGCCGCGCTCA
ACATGACCTACGGCCCCTACACGACGGGCGTGGTCAAGGAGTTCGCCGACGCGGTGTCGGTCTACCTGACCAATTTCGAT
TCGGAAACCGGCCCGCTCAAGACCGACACCATCACCATCAGCGGCGCCAGCGCCACGCCGACCTATACCTTCGCCGATCG
CGGCGAGCACCAGGCCAGTACCATCACCGCCACGCCCAGCGGCGATGGTCTGACCTTGAACGTCGCCCACAACGGGCCGC
TGGACATCACCATCCAGTGCTCCGGCTCGGCCACCGGACGCGCTAGCGCCGCGGCGGTCACACCACTGCAGGCACCGGCT
GCGCCACCCGCCTATACCGGCGTGCGGCAATACGAAGCGGAGAACTTCGACTTCCTGCGCATCGGCAGCCTTGTCGCCAA
TGGCGTCTCCGGCGCAGTGCACAACTACCAGGGGTTGGGCTATGTCGACTTCGGCGGCAACCCCGGCGCGCGTTTGCGGA
CCACCATCAACGTGCCGCAGGCGGGAAGCTATACGCTGGCCACGCGCTATTCCGCACCGGGCACAAGCGTCGGTAGCGTA
GACCTGTACGTCAATGGCGTGCGTGTCGGCACCCCGGCCTTCGCCCAGACCAGTTCGGCCAGCGACTGGGCCAGCAGTCC
GCTGACGGCAACCTTGCGTGCCGGCAACAACATCGTCGAATACCGCGCCAGTGTAGGCACCCAGGCCAAGCTGTACCTGG
ATAATCTGGCCGTCTGGCAGTAG

Upstream 100 bases:

>100_bases
CCGAGATGCGTCTGCATCGTCGACTGGCGCATTACCGCCTCACGCAATGGCAGTGACGCGGTATGCCTGGCCCTGCCCCC
CAAGCTCAACGGAACTACCG

Downstream 100 bases:

>100_bases
GCGATACCACAGCGGCGGTGCCGGCCATGCGGCCCGCCTGCTGCCGGCCCGGCCGCCGCAGGGTTGGCAGCGCGAAGGGC
CGTCACCGCTGAAGTTACAC

Product: putative secreted protein

Products: NA

Alternate protein names: Endo-Beta-Galactosidase; Lipoprotein

Number of amino acids: Translated: 780; Mature: 780

Protein sequence:

>780_residues
MILRRSRTPFLLPCVLLPCLLSSCGGDAADAGTAATPSPAATVTVSAPRAMAPTSTQASTATASASTDPAFRRSLAPDKP
MFVIHADTWNAADPQKIIDLIPADLRPYTVLLISLSISHKGATDNQCNWNQVANGIETARSWIKTAAANGVWAMVQPSSG
GFSHFPDYPNGTDLESTVYGEFFRDYPNFLGFNYAEQFWGFDEACSVSAAQRWEHWANLLKLTNKYGGYLAVSFTGGFWG
ANINPLAMVKRNEALRTALGSYAKNFIIQEKFTMNYGYHDIESVSLGMFLSGFAGHYGIRPDSSGWYAADGSAYPLAAGA
PHLIEHLTLTGETYFDGPELIWTDTVQSLPNGTTADGYNTRRWQFFPQFKNIHMDVYRKILDGTLHILDRQQVIDRTKLV
VVDDTTSGNDQSLYASPETLFSGLYLMDDDGTYLNQHSWYKKTGRYPAIPTVWQLSDDLSKSFPVQVKRSAYATRWPSIA
AKTQELNALFPQESTGDLYVARQDNTWVTYNPYKTNKTASGAFNLKYNSCAALNMTYGPYTTGVVKEFADAVSVYLTNFD
SETGPLKTDTITISGASATPTYTFADRGEHQASTITATPSGDGLTLNVAHNGPLDITIQCSGSATGRASAAAVTPLQAPA
APPAYTGVRQYEAENFDFLRIGSLVANGVSGAVHNYQGLGYVDFGGNPGARLRTTINVPQAGSYTLATRYSAPGTSVGSV
DLYVNGVRVGTPAFAQTSSASDWASSPLTATLRAGNNIVEYRASVGTQAKLYLDNLAVWQ

Sequences:

>Translated_780_residues
MILRRSRTPFLLPCVLLPCLLSSCGGDAADAGTAATPSPAATVTVSAPRAMAPTSTQASTATASASTDPAFRRSLAPDKP
MFVIHADTWNAADPQKIIDLIPADLRPYTVLLISLSISHKGATDNQCNWNQVANGIETARSWIKTAAANGVWAMVQPSSG
GFSHFPDYPNGTDLESTVYGEFFRDYPNFLGFNYAEQFWGFDEACSVSAAQRWEHWANLLKLTNKYGGYLAVSFTGGFWG
ANINPLAMVKRNEALRTALGSYAKNFIIQEKFTMNYGYHDIESVSLGMFLSGFAGHYGIRPDSSGWYAADGSAYPLAAGA
PHLIEHLTLTGETYFDGPELIWTDTVQSLPNGTTADGYNTRRWQFFPQFKNIHMDVYRKILDGTLHILDRQQVIDRTKLV
VVDDTTSGNDQSLYASPETLFSGLYLMDDDGTYLNQHSWYKKTGRYPAIPTVWQLSDDLSKSFPVQVKRSAYATRWPSIA
AKTQELNALFPQESTGDLYVARQDNTWVTYNPYKTNKTASGAFNLKYNSCAALNMTYGPYTTGVVKEFADAVSVYLTNFD
SETGPLKTDTITISGASATPTYTFADRGEHQASTITATPSGDGLTLNVAHNGPLDITIQCSGSATGRASAAAVTPLQAPA
APPAYTGVRQYEAENFDFLRIGSLVANGVSGAVHNYQGLGYVDFGGNPGARLRTTINVPQAGSYTLATRYSAPGTSVGSV
DLYVNGVRVGTPAFAQTSSASDWASSPLTATLRAGNNIVEYRASVGTQAKLYLDNLAVWQ
>Mature_780_residues
MILRRSRTPFLLPCVLLPCLLSSCGGDAADAGTAATPSPAATVTVSAPRAMAPTSTQASTATASASTDPAFRRSLAPDKP
MFVIHADTWNAADPQKIIDLIPADLRPYTVLLISLSISHKGATDNQCNWNQVANGIETARSWIKTAAANGVWAMVQPSSG
GFSHFPDYPNGTDLESTVYGEFFRDYPNFLGFNYAEQFWGFDEACSVSAAQRWEHWANLLKLTNKYGGYLAVSFTGGFWG
ANINPLAMVKRNEALRTALGSYAKNFIIQEKFTMNYGYHDIESVSLGMFLSGFAGHYGIRPDSSGWYAADGSAYPLAAGA
PHLIEHLTLTGETYFDGPELIWTDTVQSLPNGTTADGYNTRRWQFFPQFKNIHMDVYRKILDGTLHILDRQQVIDRTKLV
VVDDTTSGNDQSLYASPETLFSGLYLMDDDGTYLNQHSWYKKTGRYPAIPTVWQLSDDLSKSFPVQVKRSAYATRWPSIA
AKTQELNALFPQESTGDLYVARQDNTWVTYNPYKTNKTASGAFNLKYNSCAALNMTYGPYTTGVVKEFADAVSVYLTNFD
SETGPLKTDTITISGASATPTYTFADRGEHQASTITATPSGDGLTLNVAHNGPLDITIQCSGSATGRASAAAVTPLQAPA
APPAYTGVRQYEAENFDFLRIGSLVANGVSGAVHNYQGLGYVDFGGNPGARLRTTINVPQAGSYTLATRYSAPGTSVGSV
DLYVNGVRVGTPAFAQTSSASDWASSPLTATLRAGNNIVEYRASVGTQAKLYLDNLAVWQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84398; Mature: 84398

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILRRSRTPFLLPCVLLPCLLSSCGGDAADAGTAATPSPAATVTVSAPRAMAPTSTQAST
CCEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
ATASASTDPAFRRSLAPDKPMFVIHADTWNAADPQKIIDLIPADLRPYTVLLISLSISHK
EECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCC
GATDNQCNWNQVANGIETARSWIKTAAANGVWAMVQPSSGGFSHFPDYPNGTDLESTVYG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
EFFRDYPNFLGFNYAEQFWGFDEACSVSAAQRWEHWANLLKLTNKYGGYLAVSFTGGFWG
HHHHHCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
ANINPLAMVKRNEALRTALGSYAKNFIIQEKFTMNYGYHDIESVSLGMFLSGFAGHYGIR
CCCCEEEEEECCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
PDSSGWYAADGSAYPLAAGAPHLIEHLTLTGETYFDGPELIWTDTVQSLPNGTTADGYNT
CCCCCCEECCCCCCCCCCCCHHHHHEEEECCCEEECCCCEEEEHHHHHCCCCCCCCCCCC
RRWQFFPQFKNIHMDVYRKILDGTLHILDRQQVIDRTKLVVVDDTTSGNDQSLYASPETL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEECHHHH
FSGLYLMDDDGTYLNQHSWYKKTGRYPAIPTVWQLSDDLSKSFPVQVKRSAYATRWPSIA
HCCEEEECCCCCCCCCCCHHHHCCCCCCCCEEEECCHHHCCCCCEEEECCHHHHCCCCHH
AKTQELNALFPQESTGDLYVARQDNTWVTYNPYKTNKTASGAFNLKYNSCAALNMTYGPY
HHHHHHHEECCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCC
TTGVVKEFADAVSVYLTNFDSETGPLKTDTITISGASATPTYTFADRGEHQASTITATPS
CHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEEECCC
GDGLTLNVAHNGPLDITIQCSGSATGRASAAAVTPLQAPAAPPAYTGVRQYEAENFDFLR
CCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCEEE
IGSLVANGVSGAVHNYQGLGYVDFGGNPGARLRTTINVPQAGSYTLATRYSAPGTSVGSV
HHHHHHCCCCCHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEE
DLYVNGVRVGTPAFAQTSSASDWASSPLTATLRAGNNIVEYRASVGTQAKLYLDNLAVWQ
EEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEHHCCCCEEEEEECCEECCC
>Mature Secondary Structure
MILRRSRTPFLLPCVLLPCLLSSCGGDAADAGTAATPSPAATVTVSAPRAMAPTSTQAST
CCEECCCCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC
ATASASTDPAFRRSLAPDKPMFVIHADTWNAADPQKIIDLIPADLRPYTVLLISLSISHK
EECCCCCCHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEECCC
GATDNQCNWNQVANGIETARSWIKTAAANGVWAMVQPSSGGFSHFPDYPNGTDLESTVYG
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHH
EFFRDYPNFLGFNYAEQFWGFDEACSVSAAQRWEHWANLLKLTNKYGGYLAVSFTGGFWG
HHHHHCHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
ANINPLAMVKRNEALRTALGSYAKNFIIQEKFTMNYGYHDIESVSLGMFLSGFAGHYGIR
CCCCEEEEEECCHHHHHHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC
PDSSGWYAADGSAYPLAAGAPHLIEHLTLTGETYFDGPELIWTDTVQSLPNGTTADGYNT
CCCCCCEECCCCCCCCCCCCHHHHHEEEECCCEEECCCCEEEEHHHHHCCCCCCCCCCCC
RRWQFFPQFKNIHMDVYRKILDGTLHILDRQQVIDRTKLVVVDDTTSGNDQSLYASPETL
CEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCEEEECHHHH
FSGLYLMDDDGTYLNQHSWYKKTGRYPAIPTVWQLSDDLSKSFPVQVKRSAYATRWPSIA
HCCEEEECCCCCCCCCCCHHHHCCCCCCCCEEEECCHHHCCCCCEEEECCHHHHCCCCHH
AKTQELNALFPQESTGDLYVARQDNTWVTYNPYKTNKTASGAFNLKYNSCAALNMTYGPY
HHHHHHHEECCCCCCCCEEEEEECCEEEEECCCCCCCCCCCEEEEEECCEEEEEEECCCC
TTGVVKEFADAVSVYLTNFDSETGPLKTDTITISGASATPTYTFADRGEHQASTITATPS
CHHHHHHHHHHHEEEEECCCCCCCCEEEEEEEEECCCCCCEEEECCCCCCCCEEEEECCC
GDGLTLNVAHNGPLDITIQCSGSATGRASAAAVTPLQAPAAPPAYTGVRQYEAENFDFLR
CCCEEEEEECCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCHHHHCCCCCCEEE
IGSLVANGVSGAVHNYQGLGYVDFGGNPGARLRTTINVPQAGSYTLATRYSAPGTSVGSV
HHHHHHCCCCCHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCEE
DLYVNGVRVGTPAFAQTSSASDWASSPLTATLRAGNNIVEYRASVGTQAKLYLDNLAVWQ
EEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEHHCCCCEEEEEECCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA