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The map label for this gene is yraN [C]

Identifier: 78046372

GI number: 78046372

Start: 930794

End: 931162

Strand: Reverse

Name: yraN [C]

Synonym: XCV0816

Alternate gene names: 78046372

Gene position: 931162-930794 (Counterclockwise)

Preceding gene: 78046373

Following gene: 78046371

Centisome position: 17.98

GC content: 69.92

Gene sequence:

>369_bases
ATGCCGGCGGCGCGTCAGCAGCGTGGTGCGGCGGTCGAGGCGGCCGCACGCGCGTTGCTGGAGCAGGCCGGGCTGCGGCT
GGTGGTTGGCAATGCCAACTACCGTGGCGGCGAACTGGATCTGGTGATGCGCGACGGGCCAGCGCTGGTGTTCGTGGAAG
TGCGTTACCGGCGCGACGACCGCTTCGGCGGCGGTGCGGCATCGGTGGACTGGCGCAAACGTCGCAAGCTGGTGCTGGCC
GCGCAGTTGTTTCTTGGCGCCCACCCGACCCTGGCCGCGCTGCCGTGCCGCTTCGATGTGGTCGATGCCAGCGGCGAACC
GCCGGTATTGCACTGGATTCGCGACGCGTTCCGCGCCGACGATTGCTGA

Upstream 100 bases:

>100_bases
CACCCTGCATCTGGATGGCTTCGGCAATGTGTTGCGCACGCCGGCCTGGTCCACCTTCAGCGGCGGCCGCCCCACGCCGA
TCGCCGACGGCCGCTGAGCC

Downstream 100 bases:

>100_bases
CCGCCACCGACGCTCACGCCAACGTTTTTATGCCAACCGTCATGACCCACGCAGCCGTGCCATTGGCGCTGTGGTGCGCC
AGTGAACGCGGCCGCATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MPAARQQRGAAVEAAARALLEQAGLRLVVGNANYRGGELDLVMRDGPALVFVEVRYRRDDRFGGGAASVDWRKRRKLVLA
AQLFLGAHPTLAALPCRFDVVDASGEPPVLHWIRDAFRADDC

Sequences:

>Translated_122_residues
MPAARQQRGAAVEAAARALLEQAGLRLVVGNANYRGGELDLVMRDGPALVFVEVRYRRDDRFGGGAASVDWRKRRKLVLA
AQLFLGAHPTLAALPCRFDVVDASGEPPVLHWIRDAFRADDC
>Mature_121_residues
PAARQQRGAAVEAAARALLEQAGLRLVVGNANYRGGELDLVMRDGPALVFVEVRYRRDDRFGGGAASVDWRKRRKLVLAA
QLFLGAHPTLAALPCRFDVVDASGEPPVLHWIRDAFRADDC

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=49.5575221238938, Blast_Score=104, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13353; Mature: 13222

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAARQQRGAAVEAAARALLEQAGLRLVVGNANYRGGELDLVMRDGPALVFVEVRYRRDD
CCCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCEEEEEEEEECCCC
RFGGGAASVDWRKRRKLVLAAQLFLGAHPTLAALPCRFDVVDASGEPPVLHWIRDAFRAD
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCCC
DC
CC
>Mature Secondary Structure 
PAARQQRGAAVEAAARALLEQAGLRLVVGNANYRGGELDLVMRDGPALVFVEVRYRRDD
CCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCEEEEEEEEECCCC
RFGGGAASVDWRKRRKLVLAAQLFLGAHPTLAALPCRFDVVDASGEPPVLHWIRDAFRAD
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCHHHHHHHHHCCC
DC
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA