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The map label for this gene is ybcI [H]

Identifier: 78046371

GI number: 78046371

Start: 930225

End: 930764

Strand: Reverse

Name: ybcI [H]

Synonym: XCV0815

Alternate gene names: 78046371

Gene position: 930764-930225 (Counterclockwise)

Preceding gene: 78046372

Following gene: 78046370

Centisome position: 17.97

GC content: 68.15

Gene sequence:

>540_bases
ATGCCAACCGTCATGACCCACGCAGCCGTGCCATTGGCGCTGTGGTGCGCCAGTGAACGCGGCCGCATCTCGCCACGCCT
GCTCGCGGCCGGCGTGGCGGCGGCGATGCTGCCCGATGCCGATGTGCTGGCGTTCGCGCTGCACATTCCCTACGCCGATG
CGTTTGGCCATCGCGGCGCCAGCCACTCGCTGTTGTTCGCCGCAATCGTGGGGTTGCTCGGCGTTGCGTCACATCGCCTG
TTGCGCGCGGATGCCGTGCAGGCGTCTGTGTTTTTGTTCGTCTGTGCCGCCTCGCACCCGCTGCTGGATGCGATGACTTC
CGGCGGCCTGGGCGTGGCACTGGGCTGGCCGTGGAGCCAGACGCGCTGGTTCGCGCCATGGCGGCCGATCCGGGTGTCGC
CATTTGCCACCGGCTTCTTCAATGCGCGTGGCCTGAGCACGCTGCTCTCCGAGCTGCGCTGGGTCTGGCTGCCGCTCACC
GTCGCCGTGCTGGGGTGGAAATGCATCCAGCGCGCGGCACCACAGGATCGCATGTCATGA

Upstream 100 bases:

>100_bases
TGGTCGATGCCAGCGGCGAACCGCCGGTATTGCACTGGATTCGCGACGCGTTCCGCGCCGACGATTGCTGACCGCCACCG
ACGCTCACGCCAACGTTTTT

Downstream 100 bases:

>100_bases
CCGATGTACTTCCCACCGCACTTGCCGAGGTGTTGGCCACGCGCCTGGGTACCGATGGCTGGTTGACCGGCGACGATGCG
CGCCGCCGCTATGGCGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MPTVMTHAAVPLALWCASERGRISPRLLAAGVAAAMLPDADVLAFALHIPYADAFGHRGASHSLLFAAIVGLLGVASHRL
LRADAVQASVFLFVCAASHPLLDAMTSGGLGVALGWPWSQTRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLT
VAVLGWKCIQRAAPQDRMS

Sequences:

>Translated_179_residues
MPTVMTHAAVPLALWCASERGRISPRLLAAGVAAAMLPDADVLAFALHIPYADAFGHRGASHSLLFAAIVGLLGVASHRL
LRADAVQASVFLFVCAASHPLLDAMTSGGLGVALGWPWSQTRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLT
VAVLGWKCIQRAAPQDRMS
>Mature_178_residues
PTVMTHAAVPLALWCASERGRISPRLLAAGVAAAMLPDADVLAFALHIPYADAFGHRGASHSLLFAAIVGLLGVASHRLL
RADAVQASVFLFVCAASHPLLDAMTSGGLGVALGWPWSQTRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLTV
AVLGWKCIQRAAPQDRMS

Specific function: Unknown

COG id: COG1988

COG function: function code R; Predicted membrane-bound metal-dependent hydrolases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786738, Length=171, Percent_Identity=49.7076023391813, Blast_Score=137, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007404 [H]

Pfam domain/function: PF04307 DUF457 [H]

EC number: NA

Molecular weight: Translated: 19251; Mature: 19120

Theoretical pI: Translated: 11.06; Mature: 11.06

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTVMTHAAVPLALWCASERGRISPRLLAAGVAAAMLPDADVLAFALHIPYADAFGHRGA
CCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC
SHSLLFAAIVGLLGVASHRLLRADAVQASVFLFVCAASHPLLDAMTSGGLGVALGWPWSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCC
TRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLTVAVLGWKCIQRAAPQDRMS
CEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PTVMTHAAVPLALWCASERGRISPRLLAAGVAAAMLPDADVLAFALHIPYADAFGHRGA
CCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHCCCCC
SHSLLFAAIVGLLGVASHRLLRADAVQASVFLFVCAASHPLLDAMTSGGLGVALGWPWSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEEECCCCCC
TRWFAPWRPIRVSPFATGFFNARGLSTLLSELRWVWLPLTVAVLGWKCIQRAAPQDRMS
CEEECCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 7567469 [H]