| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is yecE [C]
Identifier: 78046217
GI number: 78046217
Start: 745261
End: 746031
Strand: Reverse
Name: yecE [C]
Synonym: XCV0661
Alternate gene names: 78046217
Gene position: 746031-745261 (Counterclockwise)
Preceding gene: 78046219
Following gene: 78046216
Centisome position: 14.41
GC content: 69.13
Gene sequence:
>771_bases ATGCCAGCTCGTCCATCCGGTGCCATTGCACGTGTGCGTTGTGGTTGCGCGGGCTGGTCGATTCCTGCCGCCGACCGTGC ACAGTTCGGCGAGGGCGCCAGCGTGTTGCAGCGCTACGCCACGCGTTTTGACGCGGTGGAAATCAATTCCTCGTTCTATC GCCCGCATCGCGCCAGCACCTACGCACGATGGGCCGACAGCGTACCGGAGGACTTTCGTTTTTCGGTCAAGCTGCCGCGC AGCATCAGCCACGACGCGCGCCTGCACGGCACCGGGCCGCTGCTGGATGCCTTCCTGGCGCAGGCCGGCGCGTTGGGAAC ACGACTGGGCTGCCTGCTGCTGCAACTGCCGCCCAGCGCGGCCTTCGATGCCGCGGTGGCCGCGCGGTTTTTCACGATGC TGCGCCGGCGCTGGGACGGTGGCGTGGTCTGCGAACCACGCCACGCCAGTTGGTTCACTGCACCTGCGCAGGCGCTGCTG GCACGCCATCGCATTGCACGCTGCGCCGCCGACCCGGCGCCGGTGCCCGCGGCCTCCCTCCCGAGCCCGGCTGCTGCGCC GCTTTACTGGCGCTGGCATGGCGCCCCGCGTATCTACTACAGCAGCTACGCGCACACCGCGCTGCAGGCGCTGGCCGCCA CGGTGCGCGCCAGCCACCCGGATAGCACGCCGCCACCGCCCGAACGCTGGGTGATCTTCGACAACACCGCAGCCGGGTGC GCCACCTCCAATGCGCTGGAATTACAGCGCCTGCTGAAGAACGAGCGCTAG
Upstream 100 bases:
>100_bases CCAGTATCGAAGCGCTGCGTGATTCGCCCGTGATCGCGATGCACACGGCATCCTGACGCACGCGCATGCATACAGTGCTG CCACCCTCCGCTTGCCTGCC
Downstream 100 bases:
>100_bases CGCAGCGCGGGCAGGTGCCGGTCTTCCGGCACGTCACTGGCGCGCATCTTGCAGCAGCCAGGCTGCAGGGAGGCCGACGC GCCACCATTCAAGCTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPARPSGAIARVRCGCAGWSIPAADRAQFGEGASVLQRYATRFDAVEINSSFYRPHRASTYARWADSVPEDFRFSVKLPR SISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSAAFDAAVAARFFTMLRRRWDGGVVCEPRHASWFTAPAQALL ARHRIARCAADPAPVPAASLPSPAAAPLYWRWHGAPRIYYSSYAHTALQALAATVRASHPDSTPPPPERWVIFDNTAAGC ATSNALELQRLLKNER
Sequences:
>Translated_256_residues MPARPSGAIARVRCGCAGWSIPAADRAQFGEGASVLQRYATRFDAVEINSSFYRPHRASTYARWADSVPEDFRFSVKLPR SISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSAAFDAAVAARFFTMLRRRWDGGVVCEPRHASWFTAPAQALL ARHRIARCAADPAPVPAASLPSPAAAPLYWRWHGAPRIYYSSYAHTALQALAATVRASHPDSTPPPPERWVIFDNTAAGC ATSNALELQRLLKNER >Mature_255_residues PARPSGAIARVRCGCAGWSIPAADRAQFGEGASVLQRYATRFDAVEINSSFYRPHRASTYARWADSVPEDFRFSVKLPRS ISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSAAFDAAVAARFFTMLRRRWDGGVVCEPRHASWFTAPAQALLA RHRIARCAADPAPVPAASLPSPAAAPLYWRWHGAPRIYYSSYAHTALQALAATVRASHPDSTPPPPERWVIFDNTAAGCA TSNALELQRLLKNER
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788175, Length=175, Percent_Identity=32, Blast_Score=68, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27825; Mature: 27694
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPARPSGAIARVRCGCAGWSIPAADRAQFGEGASVLQRYATRFDAVEINSSFYRPHRAST CCCCCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHCEEEECCHHCCCCCHHH YARWADSVPEDFRFSVKLPRSISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSA HHHHHHCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHEEEEECCCCH AFDAAVAARFFTMLRRRWDGGVVCEPRHASWFTAPAQALLARHRIARCAADPAPVPAASL HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC PSPAAAPLYWRWHGAPRIYYSSYAHTALQALAATVRASHPDSTPPPPERWVIFDNTAAGC CCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC ATSNALELQRLLKNER CCCHHHHHHHHHHCCC >Mature Secondary Structure PARPSGAIARVRCGCAGWSIPAADRAQFGEGASVLQRYATRFDAVEINSSFYRPHRAST CCCCCCCEEEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHCEEEECCHHCCCCCHHH YARWADSVPEDFRFSVKLPRSISHDARLHGTGPLLDAFLAQAGALGTRLGCLLLQLPPSA HHHHHHCCCCCCEEEEECCCCCCCCCEECCCCHHHHHHHHHHCCHHHHHHEEEEECCCCH AFDAAVAARFFTMLRRRWDGGVVCEPRHASWFTAPAQALLARHRIARCAADPAPVPAASL HHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC PSPAAAPLYWRWHGAPRIYYSSYAHTALQALAATVRASHPDSTPPPPERWVIFDNTAAGC CCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC ATSNALELQRLLKNER CCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA