Click here to switch to the map view.

The map label for this gene is 78046050

Identifier: 78046050

GI number: 78046050

Start: 558915

End: 559400

Strand: Reverse

Name: 78046050

Synonym: XCV0494

Alternate gene names: NA

Gene position: 559400-558915 (Counterclockwise)

Preceding gene: 78046051

Following gene: 78046048

Centisome position: 10.8

GC content: 62.55

Gene sequence:

>486_bases
ATGAGCCAAAGCACCACGACCGCGCGACCGATCGAGCGCTATTTCGCCAGCTATTCCGACGATCATCAAAACGCGACCAA
TCAGCAGATCCACGTGCTGGCGGTGCCTGCCATCCTGTGGTCGGTGGTGGCGCTGTTGTGGTGCATCCCGGTCGGCGGTA
GCTGGTTCAGCAGCGGCGTGTGGGCCGCGCTGTCGATGTTTGCGGCGTGGTCGTACTACAACCGGCTGTCGCGCCCGCTG
GGGCTGGGCATGCTGGGGATCTTTTTCTTCTTCGGCTGTCTGTGCCGGTTGATCGAAGGCCGCATCGGGCTTGGCGGCCT
GTTCACCACCGCGCTGACGGTGTTCGTGCTGGCATGGATTGCGCAGTTCGTCGGCCACAAGATCGAAGGCCGCAAACCGA
GCTTCCTGACCGATCTGACCTATCTGCTGATCGGGCCGATCTGGGTGCTGGCCAAGGCGTATCGCCAGCTGGGTTGGCGT
TACTGA

Upstream 100 bases:

>100_bases
CTGACGGTGCGTCCCTCGCCACGCCACCAAGGCGTGGCGAGGGCACATCTGCCATGGCGCCATCCGCGCGCGTATGCTTG
GATCATTCCTGGGAGGGAAC

Downstream 100 bases:

>100_bases
GCGTCGCCGACAGACCAGCCAGGCCTCACGCGCCGATCCCGAGCTCTTCGGGCAGTGGGCGAAACGCACGCGGCGCATAG
CCGAAATCGCGGCGTGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MSQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGVWAALSMFAAWSYYNRLSRPL
GLGMLGIFFFFGCLCRLIEGRIGLGGLFTTALTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWR
Y

Sequences:

>Translated_161_residues
MSQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGVWAALSMFAAWSYYNRLSRPL
GLGMLGIFFFFGCLCRLIEGRIGLGGLFTTALTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWR
Y
>Mature_160_residues
SQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGVWAALSMFAAWSYYNRLSRPLG
LGMLGIFFFFGCLCRLIEGRIGLGGLFTTALTVFVLAWIAQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWRY

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18089; Mature: 17958

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGV
CCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
WAALSMFAAWSYYNRLSRPLGLGMLGIFFFFGCLCRLIEGRIGLGGLFTTALTVFVLAWI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWRY
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQSTTTARPIERYFASYSDDHQNATNQQIHVLAVPAILWSVVALLWCIPVGGSWFSSGV
CCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
WAALSMFAAWSYYNRLSRPLGLGMLGIFFFFGCLCRLIEGRIGLGGLFTTALTVFVLAWI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
AQFVGHKIEGRKPSFLTDLTYLLIGPIWVLAKAYRQLGWRY
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA