Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78046030

Identifier: 78046030

GI number: 78046030

Start: 535866

End: 536249

Strand: Reverse

Name: 78046030

Synonym: XCV0474

Alternate gene names: NA

Gene position: 536249-535866 (Counterclockwise)

Preceding gene: 78046031

Following gene: 78046029

Centisome position: 10.36

GC content: 70.57

Gene sequence:

>384_bases
ATGCGCGCCCGTCTGCTTTGCGACCATCGCGCCGCCTACGCCAACCCGGTCCGCTTCCAGGCAGGCCAGCAGGTCGGCGT
GGGCGTGCGCGACGAAGAATGGCCGGCGTTTGCCTGGGTCACGACCGATAGCGGACGCGCCGGTTGGGCGCCGCTGGCCT
GGTTGCGCCCGCTGGGGGACGGCCGGGCCGAAGCCCTGCGCGATTACGACGCACGCGAACTCGATGCCCAGACAGGCGAG
GACGTGTTGCTGCATCACGAACACGGTGGCTGGTGGTGGTCCGAACGTGCCGACGGCACGCAGGGCTGGCTGCCGGCCGC
CGACCTTGAACTCCTCGACGACACCACGCCGCAGCTGCCGGCCGCGCAAGAGAACCTGCCATGA

Upstream 100 bases:

>100_bases
TACGACACGCATATCCCGCTGTTCCGGCTGGAAATGAAGTTCCTGCCGAGCGTGGAGCGCATCGTCGCCGCGGCACGTCG
CGCGGTGGCTGCCGGCTGAT

Downstream 100 bases:

>100_bases
GCGACAACAAGAATTTCCACCTGCCCGACCTGGGCGAAGGCCTGCCCGACGCCACCATCGTGGAATGGTTCGTCAAGGAG
GGCGACACCGTGCGCCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRARLLCDHRAAYANPVRFQAGQQVGVGVRDEEWPAFAWVTTDSGRAGWAPLAWLRPLGDGRAEALRDYDARELDAQTGE
DVLLHHEHGGWWWSERADGTQGWLPAADLELLDDTTPQLPAAQENLP

Sequences:

>Translated_127_residues
MRARLLCDHRAAYANPVRFQAGQQVGVGVRDEEWPAFAWVTTDSGRAGWAPLAWLRPLGDGRAEALRDYDARELDAQTGE
DVLLHHEHGGWWWSERADGTQGWLPAADLELLDDTTPQLPAAQENLP
>Mature_127_residues
MRARLLCDHRAAYANPVRFQAGQQVGVGVRDEEWPAFAWVTTDSGRAGWAPLAWLRPLGDGRAEALRDYDARELDAQTGE
DVLLHHEHGGWWWSERADGTQGWLPAADLELLDDTTPQLPAAQENLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14183; Mature: 14183

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARLLCDHRAAYANPVRFQAGQQVGVGVRDEEWPAFAWVTTDSGRAGWAPLAWLRPLGD
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCC
GRAEALRDYDARELDAQTGEDVLLHHEHGGWWWSERADGTQGWLPAADLELLDDTTPQLP
CHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCC
AAQENLP
CCCCCCC
>Mature Secondary Structure
MRARLLCDHRAAYANPVRFQAGQQVGVGVRDEEWPAFAWVTTDSGRAGWAPLAWLRPLGD
CCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCC
GRAEALRDYDARELDAQTGEDVLLHHEHGGWWWSERADGTQGWLPAADLELLDDTTPQLP
CHHHHHHCCCCCCCCCCCCCEEEEEECCCCEEECCCCCCCCCCCCCCCEEECCCCCCCCC
AAQENLP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA