Definition Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome.
Accession NC_007508
Length 5,178,466

Click here to switch to the map view.

The map label for this gene is 78045966

Identifier: 78045966

GI number: 78045966

Start: 461953

End: 462333

Strand: Reverse

Name: 78045966

Synonym: XCV0410

Alternate gene names: NA

Gene position: 462333-461953 (Counterclockwise)

Preceding gene: 78045967

Following gene: 78045965

Centisome position: 8.93

GC content: 61.68

Gene sequence:

>381_bases
ATGCGTTGCGGTATCGCTCGGCGACCTTCGTATGAACGTGCCTCCAGATGCTTGGAGGCACGTTCCGGCGCCGCTGCAGC
CATGTGCCTTGGCGAACAGGCGACGGGATACCGGAAGCTCTCCCGCGAGCATCGACATCCTGACAATGAAGACCGGCGAT
ACGCGTGGAGACTGCGTCGCGAACGATGCGGCGCGTCACCTGATCGATCGCCCGTTGCCATCTTGTACATCGCGCCGACA
GCCGATGACATCGAACGCCGAACAATCACCGCTGTCGGTGAGCAGGGATGCTGCACAGGCGCGCGCTTCTACAAAAAACT
GATTCGCCAGGCGATGCAGCCTCTTCGCGTTGATGCGGCGATGGCAGTCGCACCGCAGTAG

Upstream 100 bases:

>100_bases
GAAGTTTCGTTTCGGCGCCTTGCCGCTGGCGTTGGTGCTCGAAGGCAGGCGTTGAGGCAACGCCGGTCGATGGGCCACGA
CGTGCGGCAGCATCGCGCTG

Downstream 100 bases:

>100_bases
CCTGCACGCTTGAACGCTGCAGCCAGCCGACCAAGCAGGGTGTATCTCCATGTTCAATGTCAATCGCCTACTCCGCTCTC
GCCCGCGAACGGACAACGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MRCGIARRPSYERASRCLEARSGAAAAMCLGEQATGYRKLSREHRHPDNEDRRYAWRLRRERCGASPDRSPVAILYIAPT
ADDIERRTITAVGEQGCCTGARFYKKLIRQAMQPLRVDAAMAVAPQ

Sequences:

>Translated_126_residues
MRCGIARRPSYERASRCLEARSGAAAAMCLGEQATGYRKLSREHRHPDNEDRRYAWRLRRERCGASPDRSPVAILYIAPT
ADDIERRTITAVGEQGCCTGARFYKKLIRQAMQPLRVDAAMAVAPQ
>Mature_126_residues
MRCGIARRPSYERASRCLEARSGAAAAMCLGEQATGYRKLSREHRHPDNEDRRYAWRLRRERCGASPDRSPVAILYIAPT
ADDIERRTITAVGEQGCCTGARFYKKLIRQAMQPLRVDAAMAVAPQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14181; Mature: 14181

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCGIARRPSYERASRCLEARSGAAAAMCLGEQATGYRKLSREHRHPDNEDRRYAWRLRR
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
ERCGASPDRSPVAILYIAPTADDIERRTITAVGEQGCCTGARFYKKLIRQAMQPLRVDAA
HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MAVAPQ
HHCCCC
>Mature Secondary Structure
MRCGIARRPSYERASRCLEARSGAAAAMCLGEQATGYRKLSREHRHPDNEDRRYAWRLRR
CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH
ERCGASPDRSPVAILYIAPTADDIERRTITAVGEQGCCTGARFYKKLIRQAMQPLRVDAA
HHCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MAVAPQ
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA