| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045917
Identifier: 78045917
GI number: 78045917
Start: 412820
End: 413152
Strand: Reverse
Name: 78045917
Synonym: XCV0361
Alternate gene names: NA
Gene position: 413152-412820 (Counterclockwise)
Preceding gene: 78045924
Following gene: 78045916
Centisome position: 7.98
GC content: 66.37
Gene sequence:
>333_bases GTGGCTTGCGACCGCCTGCACACGCTAGCCCATTGCGCTGCCGGTTCAAGGCCGATGACCGCAACGCTGTGCGCTTATCG GAAATGCGCCAACACACTTGGCCAGCGCTGCGATGTCTTCGGATGCACCGCGTCACGTGCTGCCCGCGGCTTTGGAATCT CTGGCGACGCGACACACTCCATTGCACGTCGGCCCACCCGGCCACCTCTGCCAGCCACCTCGCACACATTGCATCCGTGC GTTGGTGACTGCAGCCCGGTGCGCTGCCGCAGCGGCAACCGCAGCGCAGGTATCATCCGCGGCGTGTCCGCAGTGGGCGG CACGCTGACCTGA
Upstream 100 bases:
>100_bases GAGAGGGTTGAGGCGAAGGCACTGCAGTGGCCGTTGAACGGCGCAGTGTGCGAGACCGGCTAAACCGCGGTGCAGCGATG CGTGCAATCGCCGATGCGCA
Downstream 100 bases:
>100_bases CGGAGATGCCGTGACCCCGATTCGCTCCTTTTTGCACCACACCCCGCAACTGGGCGCCCGCGTTTACGTGGATTCTGCCT GCACCATCATCGGCGAGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MACDRLHTLAHCAAGSRPMTATLCAYRKCANTLGQRCDVFGCTASRAARGFGISGDATHSIARRPTRPPLPATSHTLHPC VGDCSPVRCRSGNRSAGIIRGVSAVGGTLT
Sequences:
>Translated_110_residues MACDRLHTLAHCAAGSRPMTATLCAYRKCANTLGQRCDVFGCTASRAARGFGISGDATHSIARRPTRPPLPATSHTLHPC VGDCSPVRCRSGNRSAGIIRGVSAVGGTLT >Mature_109_residues ACDRLHTLAHCAAGSRPMTATLCAYRKCANTLGQRCDVFGCTASRAARGFGISGDATHSIARRPTRPPLPATSHTLHPCV GDCSPVRCRSGNRSAGIIRGVSAVGGTLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11394; Mature: 11263
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 8.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACDRLHTLAHCAAGSRPMTATLCAYRKCANTLGQRCDVFGCTASRAARGFGISGDATHS CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHH IARRPTRPPLPATSHTLHPCVGDCSPVRCRSGNRSAGIIRGVSAVGGTLT HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure ACDRLHTLAHCAAGSRPMTATLCAYRKCANTLGQRCDVFGCTASRAARGFGISGDATHS CCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHH IARRPTRPPLPATSHTLHPCVGDCSPVRCRSGNRSAGIIRGVSAVGGTLT HHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA