| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is 78045764
Identifier: 78045764
GI number: 78045764
Start: 243447
End: 244043
Strand: Reverse
Name: 78045764
Synonym: XCV0208
Alternate gene names: NA
Gene position: 244043-243447 (Counterclockwise)
Preceding gene: 78045766
Following gene: 78045757
Centisome position: 4.71
GC content: 59.46
Gene sequence:
>597_bases ATGAAGACTTCTTTGCTGGCCCTCGGCCTTCTCGCAGCTCTGCCGTTTGCGGCTTCGGCTGCTGAAAACCTCTCCTACAA CTTCGTCGAAGGCGACTACGTGCGCACGCCGACCGAAGGTCGCGATGCAGACGGCTGGGGCGTGAAGGCCTCCTACGCCA TCGCTCCGAATTTCCACGTGTTCGGCGATTACAGCAAGCAGAATGCTGACGACAACAACAACGTGTTCGAAAACACCGAC TCGGACTTCCAGCAGTGGGGCGTCGGCGTGGGCTTCAACCACGAAATCGCCACGAGCACCGACTTCGTTGCGCGCGTTGC CTACCGCAAGCTGGACCTGGACACCCCGAACATCAACTTCGACGGCTACAGCGTTGAAGCCGGTCTGCGTAACGCCTTCG GCGAGCACTTCGAAGTCTATGCCCTGGCTGGCTACGAAGATTTCTCCAAGAAGCGTGGCATCGACATCGGCGACAACTTC TACGGCCGCCTTGGCGCCCAGGTGAAGTTGAACCAGAACTGGGGCATCAACGGCGACATCCGTATGGATGGCGACGGCAA CAAGGAATGGTCGGTCGGCCCGCGCTTCAGCTGGTAA
Upstream 100 bases:
>100_bases TCATGTCGCGTTCCATCGAATAACGGAGAATTTACATCTCGGCAGCGAACGGCATCCGCCTCAGCGCCGGTCCAATCAAA TAAGTACAGGTATCCCGATC
Downstream 100 bases:
>100_bases GCCGCACGTTTGACTGCAGCGCGCTCTCTCTCCCGCGTTGCACTGGAAGCCCGGTCCCCCGACCGGGCTTCTTTCTTTTG GGCGATCGGTTGGCGGTTTG
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTEGRDADGWGVKASYAIAPNFHVFGDYSKQNADDNNNVFENTD SDFQQWGVGVGFNHEIATSTDFVARVAYRKLDLDTPNINFDGYSVEAGLRNAFGEHFEVYALAGYEDFSKKRGIDIGDNF YGRLGAQVKLNQNWGINGDIRMDGDGNKEWSVGPRFSW
Sequences:
>Translated_198_residues MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTEGRDADGWGVKASYAIAPNFHVFGDYSKQNADDNNNVFENTD SDFQQWGVGVGFNHEIATSTDFVARVAYRKLDLDTPNINFDGYSVEAGLRNAFGEHFEVYALAGYEDFSKKRGIDIGDNF YGRLGAQVKLNQNWGINGDIRMDGDGNKEWSVGPRFSW >Mature_198_residues MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTEGRDADGWGVKASYAIAPNFHVFGDYSKQNADDNNNVFENTD SDFQQWGVGVGFNHEIATSTDFVARVAYRKLDLDTPNINFDGYSVEAGLRNAFGEHFEVYALAGYEDFSKKRGIDIGDNF YGRLGAQVKLNQNWGINGDIRMDGDGNKEWSVGPRFSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21906; Mature: 21906
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTEGRDADGWGVKASYAIAPNFHV CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCEEEEEEECCCEEE FGDYSKQNADDNNNVFENTDSDFQQWGVGVGFNHEIATSTDFVARVAYRKLDLDTPNINF ECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DGYSVEAGLRNAFGEHFEVYALAGYEDFSKKRGIDIGDNFYGRLGAQVKLNQNWGINGDI CCEEECHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCCCCHHCCCCEEEECCCCCCCCEE RMDGDGNKEWSVGPRFSW EECCCCCCCCCCCCCCCC >Mature Secondary Structure MKTSLLALGLLAALPFAASAAENLSYNFVEGDYVRTPTEGRDADGWGVKASYAIAPNFHV CCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCEEEEEEECCCEEE FGDYSKQNADDNNNVFENTDSDFQQWGVGVGFNHEIATSTDFVARVAYRKLDLDTPNINF ECCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC DGYSVEAGLRNAFGEHFEVYALAGYEDFSKKRGIDIGDNFYGRLGAQVKLNQNWGINGDI CCEEECHHHHHHCCCCEEEEEEECCHHHHHHCCCCCCCCCHHCCCCEEEECCCCCCCCEE RMDGDGNKEWSVGPRFSW EECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA