| Definition | Xanthomonas campestris pv. vesicatoria str. 85-10 chromosome, complete genome. |
|---|---|
| Accession | NC_007508 |
| Length | 5,178,466 |
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The map label for this gene is cbbFC [H]
Identifier: 78045654
GI number: 78045654
Start: 114233
End: 115288
Strand: Reverse
Name: cbbFC [H]
Synonym: XCV0098
Alternate gene names: 78045654
Gene position: 115288-114233 (Counterclockwise)
Preceding gene: 78045655
Following gene: 78045653
Centisome position: 2.23
GC content: 64.58
Gene sequence:
>1056_bases ATGGCGACAATGGCGGCCCACTTCCTACACAGGCTGCCCGTTCCCATGTCGCGTCCCTCGCTGACCCGCTTCCTGATCGA AGAGCAACACGCCGGCCGTATCGATGCGGAATTGCGCCAGCTGATCACCATCGTCTCGCGCGCCTGCAAGCGCATCTCCA TCGCCGTGAGCAAGGGCACCCTGGGCGGCGTGCTCGGCGATGCCGGCACCGGCAACGTGCAGGGCGAAGCACAGAAAAAG CTCGATGTGCTCAGCAACGACATCCTGCTCGAAGCCAACGCCTGGGGCGGCCATCTGGCCGCGTGCGCGTCCGAAGAAAT GGACCACAGCCAGCCGGTGCCCGACCAATACCCCAGCGGCGATTTCCTGCTGTTGTTCGATCCCTTGGACGGCAGCTCCA ATATCGACGTCAATGTCTCGGTGGGCACGATCTTCTCGGTATTGCGCGCGCCCAAGGGCACCGAAAAGCCGGGCGACGAG CACTTCCTGCAGCCGGGCACCCAACAGGTCGCCGCCGGCTACTGCATCTACGGCCCCAGCACCATGCTGGTGCTCACGCT GGGCCACGGCACCCACGCCTTCACCCTGGAGCGCGAAGAAGGCAGCTTCCTGCTGACCCAGGCCAACATGCGCGTGCCCG AAGACACCGCCGAATACGCCATCAACATGTCCAACCAACGCCACTGGGAACCGGCGATGCAGGCCTACGTGGGCGACCTG CTGGCCGGCAAGGACGGCGCGCGCGGCAAGGACTTCAACATGCGCTGGATCGCCAGCATGGTCGCCGACGTGCACCGCAT CCTCACCCGCGGCGGCATCTTCATCTACCCGTGGGACAAAAAAGACCCGAGCAAGCCGGGCAAGCTGCGCCTGATGTACG AAGCCAACCCGATGAGCATGCTGGTGGAACAGGCCGGCGGCGCGGCAACCACCGGGCGCGAACGCATTCTCGACATCCAG CCGACACAGCTGCACCAGCGCGTACCGGTGTTCCTGGGCTCGAAGAACGAAGTGGCCGAAGCGACGCGATATCACCTGGA TGCCGATAAGGCGTAA
Upstream 100 bases:
>100_bases TGGTGTACAGCGAACGCCGGCCACATAAGGTTCAAGGGGTGCACTCCTGAAGTCGCTGCAGAGCAGAACGCGCACCCGAT GATCGAAATCTAACGCCGCA
Downstream 100 bases:
>100_bases GGCAGCGGGTGCAGCTTGCAAGGCACGCAAACTGGATTCCACAAGACACCCGCCTAGTGCGGGTGTCTTGGTTCATGGCG CCCGCTGATTGCAGCGCTCA
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 [H]
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MATMAAHFLHRLPVPMSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGTLGGVLGDAGTGNVQGEAQKK LDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDE HFLQPGTQQVAAGYCIYGPSTMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDL LAGKDGARGKDFNMRWIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRERILDIQ PTQLHQRVPVFLGSKNEVAEATRYHLDADKA
Sequences:
>Translated_351_residues MATMAAHFLHRLPVPMSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGTLGGVLGDAGTGNVQGEAQKK LDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDE HFLQPGTQQVAAGYCIYGPSTMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDL LAGKDGARGKDFNMRWIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRERILDIQ PTQLHQRVPVFLGSKNEVAEATRYHLDADKA >Mature_350_residues ATMAAHFLHRLPVPMSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGTLGGVLGDAGTGNVQGEAQKKL DVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSGDFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDEH FLQPGTQQVAAGYCIYGPSTMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDLL AGKDGARGKDFNMRWIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSMLVEQAGGAATTGRERILDIQP TQLHQRVPVFLGSKNEVAEATRYHLDADKA
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family [H]
Homologues:
Organism=Homo sapiens, GI189083692, Length=329, Percent_Identity=44.3768996960486, Blast_Score=261, Evalue=5e-70, Organism=Homo sapiens, GI16579888, Length=329, Percent_Identity=44.3768996960486, Blast_Score=261, Evalue=5e-70, Organism=Homo sapiens, GI22907028, Length=330, Percent_Identity=39.3939393939394, Blast_Score=233, Evalue=2e-61, Organism=Escherichia coli, GI1790679, Length=328, Percent_Identity=44.8170731707317, Blast_Score=259, Evalue=2e-70, Organism=Caenorhabditis elegans, GI17508131, Length=329, Percent_Identity=44.9848024316109, Blast_Score=259, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6323409, Length=322, Percent_Identity=40.3726708074534, Blast_Score=230, Evalue=3e-61, Organism=Drosophila melanogaster, GI45550998, Length=327, Percent_Identity=45.565749235474, Blast_Score=261, Evalue=6e-70, Organism=Drosophila melanogaster, GI19921562, Length=327, Percent_Identity=45.565749235474, Blast_Score=261, Evalue=7e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000146 [H]
Pfam domain/function: PF00316 FBPase [H]
EC number: =3.1.3.11 [H]
Molecular weight: Translated: 38358; Mature: 38227
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATMAAHFLHRLPVPMSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGT CCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCC LGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSG CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC DFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYCIYGPS CEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHCCEEEECCC TMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDL EEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHH LAGKDGARGKDFNMRWIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSM HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHH LVEQAGGAATTGRERILDIQPTQLHQRVPVFLGSKNEVAEATRYHLDADKA HHHHCCCCCCCCCCEEEECCHHHHHCCCCEEECCCHHHHHHHHHCCCCCCC >Mature Secondary Structure ATMAAHFLHRLPVPMSRPSLTRFLIEEQHAGRIDAELRQLITIVSRACKRISIAVSKGT CHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEECCC LGGVLGDAGTGNVQGEAQKKLDVLSNDILLEANAWGGHLAACASEEMDHSQPVPDQYPSG CCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCC DFLLLFDPLDGSSNIDVNVSVGTIFSVLRAPKGTEKPGDEHFLQPGTQQVAAGYCIYGPS CEEEEEECCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHCCCCCHHHHCCEEEECCC TMLVLTLGHGTHAFTLEREEGSFLLTQANMRVPEDTAEYAINMSNQRHWEPAMQAYVGDL EEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCHHHHEEECCCCCCCHHHHHHHHHHH LAGKDGARGKDFNMRWIASMVADVHRILTRGGIFIYPWDKKDPSKPGKLRLMYEANPMSM HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCEEEEECCCHHHH LVEQAGGAATTGRERILDIQPTQLHQRVPVFLGSKNEVAEATRYHLDADKA HHHHCCCCCCCCCCEEEECCHHHHHCCCCEEECCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA