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The map label for this gene is yusZ [H]

Identifier: 78045615

GI number: 78045615

Start: 70546

End: 71445

Strand: Reverse

Name: yusZ [H]

Synonym: XCV0059

Alternate gene names: 78045615

Gene position: 71445-70546 (Counterclockwise)

Preceding gene: 78045616

Following gene: 78045611

Centisome position: 1.38

GC content: 68.89

Gene sequence:

>900_bases
ATGCGCAAACGCATTCTGGTGACTGGCGCGTCCAGCGGCTTTGGCCGATTGGCCGCACAAGCGCTGGCCGCCGCCGGCCA
CACCGTCTACGCCTCCATGCGCGATACCGCCGGCCGCAATGCCGGCGTGGCGCAGGCGATGGCCGACTTGGCGGACAAGC
AGCAGCTGGCCTTGCACACGGTCGAGCTGGACGTGCAATCGCAGGCCTCGGCCGACGCGGCGGTGGCATCCATCGTGGCG
CAGGCCGGTGGGTTGGACGTGGTGGTGCACAACGCCGGGCACATGGTGTTCGGCCCGGCCGAGGCGTTCACCGCCGAACA
GCTGGCGCAGGTCTACGACATCAACGTGCTGGGTACCCAGCGGGTCAACCGCGCGGCACTGCCGCACTTGCGGGCACAGC
AGCAGGGCCTGTTGGTGTGGGTGTCCAGCAGCAGCTCGGCAGGCGGCACACCGCCGTATCTGGGCCCTTATTTCGCGGCC
AAGGCGGCGATGGACGCCTTGGCGGTGCAGTACGCACGCGAATTGGCACGCTGGGGCGTCGAGACCTCGATCATCGTGCC
CGGCGCCTTCACCAGGGGCACCAACCACTTTGCCCATGCCGGTACGCCCGACGATACCGCGCGCGCCGCTGCGTACGAGG
CCGGCCCGTATGCGGGCTTTGGCGAACAGGTGCAGCAGGCATTTGCGCGCCTGGTGCCCGAAGACGCCGACGTGGCCGAG
GTGGCGCAGGCGATCGTGCAGGTGGTGAACGCACCGTTCGGCAAGCGGCCGTTCCGGGTGCATATCGACCCGGCGGGCGA
TGGCGCGGACGTGGGCTTTGCGGTCCTCGATCGCCTGCGCGCGGAGATGCTGCACCGTGTGGGATTGGATGATCTGTTGG
CACCGCGCGTGGTGGAATGA

Upstream 100 bases:

>100_bases
TCAACGGCCAGGTCCTGCGCGCCAACGGCGGCATGGTCTGACCCGCTGTGGCGCGCGGCAGTGCGCACGCTGCTGGCTTT
CCCTCTCAAGGAGCAATGAC

Downstream 100 bases:

>100_bases
TGGGATGCGGCAGGCGCTTGGAGTGCCTGCCGGCCGTAGAGCGGCTAACAGAAGGTGGCGAGCAGTCGTCAGCTGGATGT
GGACGGCGCACTCACAACCG

Product: short chain oxidoreductase precursor

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQAMADLADKQQLALHTVELDVQSQASADAAVASIVA
QAGGLDVVVHNAGHMVFGPAEAFTAEQLAQVYDINVLGTQRVNRAALPHLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAA
KAAMDALAVQYARELARWGVETSIIVPGAFTRGTNHFAHAGTPDDTARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
VAQAIVQVVNAPFGKRPFRVHIDPAGDGADVGFAVLDRLRAEMLHRVGLDDLLAPRVVE

Sequences:

>Translated_299_residues
MRKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQAMADLADKQQLALHTVELDVQSQASADAAVASIVA
QAGGLDVVVHNAGHMVFGPAEAFTAEQLAQVYDINVLGTQRVNRAALPHLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAA
KAAMDALAVQYARELARWGVETSIIVPGAFTRGTNHFAHAGTPDDTARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
VAQAIVQVVNAPFGKRPFRVHIDPAGDGADVGFAVLDRLRAEMLHRVGLDDLLAPRVVE
>Mature_299_residues
MRKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQAMADLADKQQLALHTVELDVQSQASADAAVASIVA
QAGGLDVVVHNAGHMVFGPAEAFTAEQLAQVYDINVLGTQRVNRAALPHLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAA
KAAMDALAVQYARELARWGVETSIIVPGAFTRGTNHFAHAGTPDDTARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
VAQAIVQVVNAPFGKRPFRVHIDPAGDGADVGFAVLDRLRAEMLHRVGLDDLLAPRVVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI223718074, Length=192, Percent_Identity=35.4166666666667, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI7657478, Length=189, Percent_Identity=30.1587301587302, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI150247226, Length=191, Percent_Identity=31.413612565445, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI119392083, Length=190, Percent_Identity=30.5263157894737, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI44680136, Length=202, Percent_Identity=30.6930693069307, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI44680133, Length=202, Percent_Identity=30.6930693069307, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI17738292, Length=202, Percent_Identity=30.6930693069307, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI19743808, Length=203, Percent_Identity=29.5566502463054, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI22507405, Length=191, Percent_Identity=30.3664921465969, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI4504503, Length=211, Percent_Identity=28.9099526066351, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=27.8606965174129, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1786701, Length=239, Percent_Identity=27.6150627615063, Blast_Score=75, Evalue=8e-15,
Organism=Escherichia coli, GI1787820, Length=252, Percent_Identity=26.984126984127, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI2367175, Length=236, Percent_Identity=28.8135593220339, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1787335, Length=183, Percent_Identity=28.4153005464481, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1786812, Length=224, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1790717, Length=220, Percent_Identity=27.2727272727273, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=241, Percent_Identity=30.7053941908714, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17557780, Length=199, Percent_Identity=30.1507537688442, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115534660, Length=192, Percent_Identity=31.7708333333333, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=244, Percent_Identity=27.8688524590164, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=253, Percent_Identity=26.8774703557312, Blast_Score=66, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17559104, Length=214, Percent_Identity=28.5046728971963, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562904, Length=213, Percent_Identity=29.5774647887324, Blast_Score=65, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=209, Percent_Identity=26.7942583732057, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=196, Percent_Identity=30.1020408163265, Blast_Score=67, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322861, Length=198, Percent_Identity=25.7575757575758, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24651139, Length=200, Percent_Identity=32.5, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28571526, Length=247, Percent_Identity=32.7935222672065, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI23397609, Length=208, Percent_Identity=34.1346153846154, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571387, Length=255, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281364892, Length=189, Percent_Identity=27.5132275132275, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI21355319, Length=236, Percent_Identity=27.1186440677966, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357041, Length=189, Percent_Identity=31.7460317460317, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24644339, Length=244, Percent_Identity=30.7377049180328, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31271; Mature: 31271

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQAMADLADKQQLALHT
CCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHEEEE
VELDVQSQASADAAVASIVAQAGGLDVVVHNAGHMVFGPAEAFTAEQLAQVYDINVLGTQ
EEECCHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHHHHHHHHHHCCEEECCC
RVNRAALPHLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAAKAAMDALAVQYARELARWGV
HHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ETSIIVPGAFTRGTNHFAHAGTPDDTARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VAQAIVQVVNAPFGKRPFRVHIDPAGDGADVGFAVLDRLRAEMLHRVGLDDLLAPRVVE
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MRKRILVTGASSGFGRLAAQALAAAGHTVYASMRDTAGRNAGVAQAMADLADKQQLALHT
CCCEEEEEECCCCHHHHHHHHHHHCCCCEEEEHHHCCCCCCHHHHHHHHHHHHHHHEEEE
VELDVQSQASADAAVASIVAQAGGLDVVVHNAGHMVFGPAEAFTAEQLAQVYDINVLGTQ
EEECCHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHHHHHHHHHHCCEEECCC
RVNRAALPHLRAQQQGLLVWVSSSSSAGGTPPYLGPYFAAKAAMDALAVQYARELARWGV
HHHHHHCCHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
ETSIIVPGAFTRGTNHFAHAGTPDDTARAAAYEAGPYAGFGEQVQQAFARLVPEDADVAE
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHH
VAQAIVQVVNAPFGKRPFRVHIDPAGDGADVGFAVLDRLRAEMLHRVGLDDLLAPRVVE
HHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377; 8396117 [H]