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The map label for this gene is 78045198

Identifier: 78045198

GI number: 78045198

Start: 192410

End: 193417

Strand: Direct

Name: 78045198

Synonym: CHY_0222

Alternate gene names: NA

Gene position: 192410-193417 (Clockwise)

Preceding gene: 78044885

Following gene: 78042993

Centisome position: 8.01

GC content: 45.83

Gene sequence:

>1008_bases
ATGAGTAGCAATAATACCCTTGCCGTACGCTTAAAAGATATTTTTTGGCGGTGGGATCAGGAAAAGCTGAAACGAACTCT
GAAATGGATTTTTATAATAGAGTTAATATTTTTTATAATCTTTTATTTCCTTAACCGTAACCCGGTACCGAAAATAGTAC
CGCAAATAGGGCCGCCTGGACCACCAGCTTTCTTATATGCGATTTACGGTACCGACCAGAATCCCTTTAAAAAGCCAATG
GCGGTGGCGGTATCCGGAAACCGAATTTATGTAACCGACACCGGCAATCAGAGGGTCCAGGTTTTTGACTATGATGGTAA
TCCTCTCTTTACCTTTGGTAAACCCGGTACCGATAAAGGACAGTTCAAGTTCCCCTACGGTATTGCAGTGGACGGGGACG
GAAAAGTTTATGTAGCCGACATGTACAACGGTAAAATTTCCGTCTTTAACAGTGAAGGGATTTTCCAGTACTATTTTGGT
AACCCCTCAGATATCAGTCGTCCTGCTGGCCTGTTCATTTCCGGTAACCGCCTTTATGTGGCCGATGTCGGGAAAAATAA
AGTAACGGCGTTTACATTAGACGGGAAGAAGGTTTTGGAGTTTGGGAAGATGGGTACTGCCAACGGTGAATTTAGGGCTC
CTAACTGTGTCTGGGTTGCCAACGGTAAGATTTATGTCGCTGACTCCGGTAACGACCGGGTGCAGGTCTTTAACCTCCTT
GGCGGTTATGCCTATACTTTAACCGGCGGCAACAACAATGGTGAGACCTTCTCCTTTATTAACCCCAGGGGAGTTGGAGT
AGATGGCCGGGGAGTACTGTATGTGGTGGATAATTTAAATAGCCGGGTTTGTGGCTTTGATGAGCAGGGTAATTTCCTCT
TTACCTTTGGCAGCAAAGGGGCTGAGCTAAACCAATTTATCTTGCCCAACGGGCTTTTCGTTGATGACCAGGGCCGGATT
TACATTACCGACACCGTAAACCAGCGGGTGGTCGTATATCAAAGCTGA

Upstream 100 bases:

>100_bases
AGCAAAGTACCAGTACAAGTCGGCTTTGGAGTTTGATCCGAAATTTGAAGAAGCGAAAAAAGCTTTAGAACGGCTCAATA
AAAAGTAAAGGAGGGAGGGT

Downstream 100 bases:

>100_bases
TAATGCGACCAGTAAAAGAGCTGCTAAATTAAATGGGCAGCTTTTTTACTTTTGAAACGCATTAATTTGGTAGCTATTAG
CTGGAATTTTTTATCCGTGT

Product: NHL repeat-containing protein

Products: NA

Alternate protein names: NHL Repeat-Containing Protein; NHL Repeat Protein; SMP-30/Gluconolaconase/LRE Domain Protein; Glycoside Hydrolase Family; Tripartite Motif-Containing Protein; Peptidylamidoglycolate Lyase; PA14 Domain-Containing Protein; PKD Domain Containing Protein; Cell Surface Protein; TPR Repeat-Containing Protein; ABC Transporter Related Protein; Serine/Threonine-Protein Kinase PknD; NHL Repeat Domain Protein; Surface Layer Protein; Ring Finger; Fibronectin Type III Domain-Containing Protein; Fibronectin Type III Domain Protein; Tetratricopeptide Repeat-Containing Protein; Lipoprotein

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSSNNTLAVRLKDIFWRWDQEKLKRTLKWIFIIELIFFIIFYFLNRNPVPKIVPQIGPPGPPAFLYAIYGTDQNPFKKPM
AVAVSGNRIYVTDTGNQRVQVFDYDGNPLFTFGKPGTDKGQFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFG
NPSDISRPAGLFISGNRLYVADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVANGKIYVADSGNDRVQVFNLL
GGYAYTLTGGNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQGNFLFTFGSKGAELNQFILPNGLFVDDQGRI
YITDTVNQRVVVYQS

Sequences:

>Translated_335_residues
MSSNNTLAVRLKDIFWRWDQEKLKRTLKWIFIIELIFFIIFYFLNRNPVPKIVPQIGPPGPPAFLYAIYGTDQNPFKKPM
AVAVSGNRIYVTDTGNQRVQVFDYDGNPLFTFGKPGTDKGQFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFG
NPSDISRPAGLFISGNRLYVADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVANGKIYVADSGNDRVQVFNLL
GGYAYTLTGGNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQGNFLFTFGSKGAELNQFILPNGLFVDDQGRI
YITDTVNQRVVVYQS
>Mature_334_residues
SSNNTLAVRLKDIFWRWDQEKLKRTLKWIFIIELIFFIIFYFLNRNPVPKIVPQIGPPGPPAFLYAIYGTDQNPFKKPMA
VAVSGNRIYVTDTGNQRVQVFDYDGNPLFTFGKPGTDKGQFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGN
PSDISRPAGLFISGNRLYVADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVANGKIYVADSGNDRVQVFNLLG
GYAYTLTGGNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQGNFLFTFGSKGAELNQFILPNGLFVDDQGRIY
ITDTVNQRVVVYQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI84993742, Length=280, Percent_Identity=33.2142857142857, Blast_Score=132, Evalue=6e-31,
Organism=Homo sapiens, GI194248079, Length=275, Percent_Identity=32.3636363636364, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI194248081, Length=275, Percent_Identity=32.3636363636364, Blast_Score=110, Evalue=3e-24,
Organism=Homo sapiens, GI32454739, Length=255, Percent_Identity=34.1176470588235, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI32454737, Length=255, Percent_Identity=34.1176470588235, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17553622, Length=259, Percent_Identity=32.046332046332, Blast_Score=119, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI71980716, Length=236, Percent_Identity=33.0508474576271, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71980713, Length=236, Percent_Identity=33.0508474576271, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17554338, Length=222, Percent_Identity=28.8288288288288, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115533679, Length=185, Percent_Identity=26.4864864864865, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221330419, Length=271, Percent_Identity=34.6863468634686, Blast_Score=150, Evalue=1e-36,
Organism=Drosophila melanogaster, GI24655386, Length=271, Percent_Identity=34.6863468634686, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI22024206, Length=271, Percent_Identity=34.6863468634686, Blast_Score=150, Evalue=2e-36,
Organism=Drosophila melanogaster, GI221330033, Length=231, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI221330031, Length=231, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24586266, Length=231, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI24586264, Length=231, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI22026822, Length=231, Percent_Identity=33.3333333333333, Blast_Score=117, Evalue=8e-27,
Organism=Drosophila melanogaster, GI45552407, Length=238, Percent_Identity=28.9915966386555, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19549884, Length=238, Percent_Identity=28.9915966386555, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI17136846, Length=238, Percent_Identity=28.9915966386555, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37313; Mature: 37182

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS51125 NHL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNNTLAVRLKDIFWRWDQEKLKRTLKWIFIIELIFFIIFYFLNRNPVPKIVPQIGPPG
CCCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
PPAFLYAIYGTDQNPFKKPMAVAVSGNRIYVTDTGNQRVQVFDYDGNPLFTFGKPGTDKG
CCEEEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCC
QFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGNPSDISRPAGLFISGNRLYV
CEECCEEEEECCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCEEEE
ADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVANGKIYVADSGNDRVQVFNLL
EECCCCEEEEEEECCHHHHHHCCCCCCCCCEECCCEEEEECCEEEEEECCCCEEEEEEEC
GGYAYTLTGGNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQGNFLFTFGSKG
CCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEECCCC
AELNQFILPNGLFVDDQGRIYITDTVNQRVVVYQS
CCCCEEECCCCEEECCCCCEEEEECCCCEEEEEEC
>Mature Secondary Structure 
SSNNTLAVRLKDIFWRWDQEKLKRTLKWIFIIELIFFIIFYFLNRNPVPKIVPQIGPPG
CCCCEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCC
PPAFLYAIYGTDQNPFKKPMAVAVSGNRIYVTDTGNQRVQVFDYDGNPLFTFGKPGTDKG
CCEEEEEEEECCCCCCCCCEEEEEECCEEEEEECCCCEEEEEEECCCEEEEECCCCCCCC
QFKFPYGIAVDGDGKVYVADMYNGKISVFNSEGIFQYYFGNPSDISRPAGLFISGNRLYV
CEECCEEEEECCCCCEEEEEECCCEEEEEECCCEEEEECCCCCCCCCCCCEEEECCEEEE
ADVGKNKVTAFTLDGKKVLEFGKMGTANGEFRAPNCVWVANGKIYVADSGNDRVQVFNLL
EECCCCEEEEEEECCHHHHHHCCCCCCCCCEECCCEEEEECCEEEEEECCCCEEEEEEEC
GGYAYTLTGGNNNGETFSFINPRGVGVDGRGVLYVVDNLNSRVCGFDEQGNFLFTFGSKG
CCEEEEEECCCCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEECCCCCCCEEEEECCCC
AELNQFILPNGLFVDDQGRIYITDTVNQRVVVYQS
CCCCEEECCCCEEECCCCCEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA