Click here to switch to the map view.

The map label for this gene is 78044885

Identifier: 78044885

GI number: 78044885

Start: 191741

End: 192397

Strand: Direct

Name: 78044885

Synonym: CHY_0221

Alternate gene names: NA

Gene position: 191741-192397 (Clockwise)

Preceding gene: 78045052

Following gene: 78045198

Centisome position: 7.98

GC content: 38.66

Gene sequence:

>657_bases
TTGAGCACGGAAGTTAGACCGGTCAAAACACCCAAACCGGTGCCTCCGCTTGTAGCGTATTTAATAATAATTGTTTTTAC
AGCAACAATGTTTGTCATCGGGGTGATTATTGGTAAAGCCTTTTTTTGGGAGAATTACGATACTACACCGATAGCGGACC
GGATTATTGAAGTGGCCAAGCAGAAGGTGGCTCAAGACCCCAAAAATCCGAAAAACTACGTGGATTTGGGGTGGGGTTAT
TTTAAGAAGAAAGATTATAATAATGCTTTGTCTCAATACAAAAAAGCGATTGATTTAGACAAAAAATACTATCCGGCTTA
TTTAAACCTGGGGATTCTTTATATTGAGACCGGTAAATATGATTTAGCGGCAAACACCTTAAAGAATGCTATAGCCCTGC
AGCCGAAAAGCTCCAATGCTCACTTAAATCTCGGAATAGCCTATACTAAGCTTGGAAAATACAATGAAGCATTGAAAGAG
TTAAATGAAGCCTATAAACTTTCCCCGGGATCAACCAGGATAATTTACGAAATAGGGGTTACCTATGAAAAAATGGGTAA
AATCGAAGAAGCAAAGTACCAGTACAAGTCGGCTTTGGAGTTTGATCCGAAATTTGAAGAAGCGAAAAAAGCTTTAGAAC
GGCTCAATAAAAAGTAA

Upstream 100 bases:

>100_bases
CCTTTAAATGCCGGGACCAAACGGGATAGCAGTTGCTATCGCTGTCATAATCAAAAGTATTGTACCGGTTGCCATAAAAA
TTAAAAAAGGGGGATTTGTC

Downstream 100 bases:

>100_bases
AGGAGGGAGGGTATGAGTAGCAATAATACCCTTGCCGTACGCTTAAAAGATATTTTTTGGCGGTGGGATCAGGAAAAGCT
GAAACGAACTCTGAAATGGA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Repeat Domain Protein; Peptidase; Tetratricopeptide Repeat Family; TPR Domain Protein; TPR Domain Containing Protein; Protein Kinase; Methyltransferase Type; Tetratricopeptide TPR_1 Repeat-Containing Protein; O-Linked GlcNAc Transferase; Tetratricopeptide Repeat Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; TPR Repeats Containing Protein; TPR Repeat Protein; Non-Specific Serine/Threonine Protein Kinase; Sel1 Repeat Family; TPR Repeat-Containing Serine/Threonin Protein Kinase; Tetratricopeptide Repeat Family Protein; Social Gliding Motility Protein Tgl; Sulfotransferase; Peptidase S1 And S6 Chymotrypsin/Hap; O-Linked N-Acetylglucosamine Transferase; Glycosyl Transferase Family Protein; Doubled CXXCH Domain-Containing Protein

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MSTEVRPVKTPKPVPPLVAYLIIIVFTATMFVIGVIIGKAFFWENYDTTPIADRIIEVAKQKVAQDPKNPKNYVDLGWGY
FKKKDYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSSNAHLNLGIAYTKLGKYNEALKE
LNEAYKLSPGSTRIIYEIGVTYEKMGKIEEAKYQYKSALEFDPKFEEAKKALERLNKK

Sequences:

>Translated_218_residues
MSTEVRPVKTPKPVPPLVAYLIIIVFTATMFVIGVIIGKAFFWENYDTTPIADRIIEVAKQKVAQDPKNPKNYVDLGWGY
FKKKDYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSSNAHLNLGIAYTKLGKYNEALKE
LNEAYKLSPGSTRIIYEIGVTYEKMGKIEEAKYQYKSALEFDPKFEEAKKALERLNKK
>Mature_217_residues
STEVRPVKTPKPVPPLVAYLIIIVFTATMFVIGVIIGKAFFWENYDTTPIADRIIEVAKQKVAQDPKNPKNYVDLGWGYF
KKKDYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKYDLAANTLKNAIALQPKSSNAHLNLGIAYTKLGKYNEALKEL
NEAYKLSPGSTRIIYEIGVTYEKMGKIEEAKYQYKSALEFDPKFEEAKKALERLNKK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=153, Percent_Identity=31.3725490196078, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI32307150, Length=153, Percent_Identity=31.3725490196078, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI167466175, Length=147, Percent_Identity=27.891156462585, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI167466177, Length=147, Percent_Identity=27.891156462585, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI25147174, Length=142, Percent_Identity=32.3943661971831, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI115532692, Length=153, Percent_Identity=32.0261437908497, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115532690, Length=153, Percent_Identity=32.0261437908497, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6319387, Length=149, Percent_Identity=28.8590604026846, Blast_Score=65, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24659892, Length=152, Percent_Identity=28.9473684210526, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI17647755, Length=153, Percent_Identity=30.718954248366, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585827, Length=153, Percent_Identity=30.718954248366, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24585829, Length=153, Percent_Identity=30.718954248366, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24647123, Length=152, Percent_Identity=27.6315789473684, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24853; Mature: 24722

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTEVRPVKTPKPVPPLVAYLIIIVFTATMFVIGVIIGKAFFWENYDTTPIADRIIEVAK
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QKVAQDPKNPKNYVDLGWGYFKKKDYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKY
HHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEECEEEEEECCCC
DLAANTLKNAIALQPKSSNAHLNLGIAYTKLGKYNEALKELNEAYKLSPGSTRIIYEIGV
HHHHHHHHHHHEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
TYEKMGKIEEAKYQYKSALEFDPKFEEAKKALERLNKK
CHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
STEVRPVKTPKPVPPLVAYLIIIVFTATMFVIGVIIGKAFFWENYDTTPIADRIIEVAK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
QKVAQDPKNPKNYVDLGWGYFKKKDYNNALSQYKKAIDLDKKYYPAYLNLGILYIETGKY
HHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHCCCEEECEEEEEECCCC
DLAANTLKNAIALQPKSSNAHLNLGIAYTKLGKYNEALKELNEAYKLSPGSTRIIYEIGV
HHHHHHHHHHHEECCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
TYEKMGKIEEAKYQYKSALEFDPKFEEAKKALERLNKK
CHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA