| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78045195
Identifier: 78045195
GI number: 78045195
Start: 501231
End: 502478
Strand: Direct
Name: 78045195
Synonym: CHY_0582
Alternate gene names: NA
Gene position: 501231-502478 (Clockwise)
Preceding gene: 78043892
Following gene: 78044422
Centisome position: 20.87
GC content: 45.91
Gene sequence:
>1248_bases ATGAAAATTATCGATGCTCTTTTTGCGCCAGGACTTACCGGTTTTTATTTTGATGATCAAGAGGCCATTAAAAAAGGTGC GGTACATAACGGGTTCTGGTATGAAGGGAACCCCCAAACTCCCGGTTACAAAAGGATTCGCCAGAAGGGTGAAGCAATTC TGGTTATGCTTGTTTTGGAAAATGGGGAAGTGGCGTATGGCGATTGTGCGGCGGTGCAGTATTCGGGAACGGGAGGTCGG GACCCTCTTTTTACTGCTGAAGAGTTTTTGCCGATCCTGGAAAATGAAATACGCCCGAAGTTAATTGGGCTTGAGTTAAA TAGTTTTAGAAACCTTGCTCATATTTTTGACCGGGAGCTAACGGTTAACGGAAAACCTTTACATACCGCTTTAAGATACG GGCTAACCCAGGCGCTTTTAGATGGCGTAGCCCGGGCGCAAAAAAAGCTTATGGCGGAAGTGATAGCGGAGGAATATCAG CTACCGGTGATTCCCGAGCCGGTACCGATTTTTGTTCAAACCGGCGATGACCTATACACCAATGCCGATAAGGCAATTAT TAAAAGAGCCGACGTTTTACCCCATGCCCTTATTAATAACGTGGAGGAAAAATTAGGGCGGCAGGGGGAAAAGCTTTTAG CTTACATAAAGTGGTTGAAAAAAAGGATATTTGAGCTGGCTGGTGATGAATATCGTCCGGTGATTCATATTGACGTTTAT GGTACCGTCGGTTTAATTTTTGCCAATGACCTTGAGAAAATTGCCGGTTACCTTGCAACTTTAGCTCATGAGGCGGCTCC CTTTAAGCTTAGAATTGAAGGACCGGTAGATATGGGAAGCCTCTGGGGGCAAATCGAGGCTCTATCTAAGTTAAGGGAAA TAATTGACCGAAGAGGGATTCCCGTGGAAATTGTGGCCGATGAATGGTGTAATACCTTGGAAGACATTAAATTATTTGCT GACCATAAAGCGGGACATATGGTTCAGATTAAAACTCCCGACTTGGGCGGGATAAACAACGTTGTGGAGGCGGTGCTTTA CGCCAAAATGAAGGGTATAGGTGCATATCTGGGAGGTACCTGCAACGAAACCGACCGCTCAGCGCAAATTTCGGTACATT TGGCTCTGGCAACCCGCCCGGACCAGATGTTAGCCAAACCCGGGATGGGGTTGGATGAAGGGTTAATGATTGTTTATAAT GAAATGCAGCGAGCAATTGCCCTGTTAAAGAGGCGAGGAGGTAAATAA
Upstream 100 bases:
>100_bases CCGGAAAAATCTTTAAACCTCTATTTTTCGTCAAACCCTTGCATAGGGATTTGGGGTGGGGGTAAGATGTTTTTAGAAGC ATTTCTGGAGGGAGATAAAA
Downstream 100 bases:
>100_bases ATGGAAAAGGTGAAAATCCTATCCCCTACCGCTATTTTGGGGTACGGCTTTCCGGTTAAATCTTTTGAAGCTGGATTGGA AAAAAAGCCAGATGTTATCG
Product: methylaspartate ammonia-lyase
Products: NA
Alternate protein names: Beta-methylaspartase [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MKIIDALFAPGLTGFYFDDQEAIKKGAVHNGFWYEGNPQTPGYKRIRQKGEAILVMLVLENGEVAYGDCAAVQYSGTGGR DPLFTAEEFLPILENEIRPKLIGLELNSFRNLAHIFDRELTVNGKPLHTALRYGLTQALLDGVARAQKKLMAEVIAEEYQ LPVIPEPVPIFVQTGDDLYTNADKAIIKRADVLPHALINNVEEKLGRQGEKLLAYIKWLKKRIFELAGDEYRPVIHIDVY GTVGLIFANDLEKIAGYLATLAHEAAPFKLRIEGPVDMGSLWGQIEALSKLREIIDRRGIPVEIVADEWCNTLEDIKLFA DHKAGHMVQIKTPDLGGINNVVEAVLYAKMKGIGAYLGGTCNETDRSAQISVHLALATRPDQMLAKPGMGLDEGLMIVYN EMQRAIALLKRRGGK
Sequences:
>Translated_415_residues MKIIDALFAPGLTGFYFDDQEAIKKGAVHNGFWYEGNPQTPGYKRIRQKGEAILVMLVLENGEVAYGDCAAVQYSGTGGR DPLFTAEEFLPILENEIRPKLIGLELNSFRNLAHIFDRELTVNGKPLHTALRYGLTQALLDGVARAQKKLMAEVIAEEYQ LPVIPEPVPIFVQTGDDLYTNADKAIIKRADVLPHALINNVEEKLGRQGEKLLAYIKWLKKRIFELAGDEYRPVIHIDVY GTVGLIFANDLEKIAGYLATLAHEAAPFKLRIEGPVDMGSLWGQIEALSKLREIIDRRGIPVEIVADEWCNTLEDIKLFA DHKAGHMVQIKTPDLGGINNVVEAVLYAKMKGIGAYLGGTCNETDRSAQISVHLALATRPDQMLAKPGMGLDEGLMIVYN EMQRAIALLKRRGGK >Mature_415_residues MKIIDALFAPGLTGFYFDDQEAIKKGAVHNGFWYEGNPQTPGYKRIRQKGEAILVMLVLENGEVAYGDCAAVQYSGTGGR DPLFTAEEFLPILENEIRPKLIGLELNSFRNLAHIFDRELTVNGKPLHTALRYGLTQALLDGVARAQKKLMAEVIAEEYQ LPVIPEPVPIFVQTGDDLYTNADKAIIKRADVLPHALINNVEEKLGRQGEKLLAYIKWLKKRIFELAGDEYRPVIHIDVY GTVGLIFANDLEKIAGYLATLAHEAAPFKLRIEGPVDMGSLWGQIEALSKLREIIDRRGIPVEIVADEWCNTLEDIKLFA DHKAGHMVQIKTPDLGGINNVVEAVLYAKMKGIGAYLGGTCNETDRSAQISVHLALATRPDQMLAKPGMGLDEGLMIVYN EMQRAIALLKRRGGK
Specific function: Unknown
COG id: COG3799
COG function: function code E; Methylaspartate ammonia-lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006395 - InterPro: IPR022662 - InterPro: IPR022665 [H]
Pfam domain/function: PF07476 MAAL_C; PF05034 MAAL_N [H]
EC number: =4.3.1.2 [H]
Molecular weight: Translated: 46001; Mature: 46001
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIDALFAPGLTGFYFDDQEAIKKGAVHNGFWYEGNPQTPGYKRIRQKGEAILVMLVLE CCHHHHHHCCCCCCEEECCHHHHHHCCCCCCCEECCCCCCCHHHHHHHCCCEEEEEEEEE NGEVAYGDCAAVQYSGTGGRDPLFTAEEFLPILENEIRPKLIGLELNSFRNLAHIFDREL CCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCE TVNGKPLHTALRYGLTQALLDGVARAQKKLMAEVIAEEYQLPVIPEPVPIFVQTGDDLYT ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHC NADKAIIKRADVLPHALINNVEEKLGRQGEKLLAYIKWLKKRIFELAGDEYRPVIHIDVY CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GTVGLIFANDLEKIAGYLATLAHEAAPFKLRIEGPVDMGSLWGQIEALSKLREIIDRRGI CCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC PVEIVADEWCNTLEDIKLFADHKAGHMVQIKTPDLGGINNVVEAVLYAKMKGIGAYLGGT CEEEECHHHHCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC CNETDRSAQISVHLALATRPDQMLAKPGMGLDEGLMIVYNEMQRAIALLKRRGGK CCCCCCCEEEEEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIIDALFAPGLTGFYFDDQEAIKKGAVHNGFWYEGNPQTPGYKRIRQKGEAILVMLVLE CCHHHHHHCCCCCCEEECCHHHHHHCCCCCCCEECCCCCCCHHHHHHHCCCEEEEEEEEE NGEVAYGDCAAVQYSGTGGRDPLFTAEEFLPILENEIRPKLIGLELNSFRNLAHIFDREL CCCEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCE TVNGKPLHTALRYGLTQALLDGVARAQKKLMAEVIAEEYQLPVIPEPVPIFVQTGDDLYT ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHC NADKAIIKRADVLPHALINNVEEKLGRQGEKLLAYIKWLKKRIFELAGDEYRPVIHIDVY CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC GTVGLIFANDLEKIAGYLATLAHEAAPFKLRIEGPVDMGSLWGQIEALSKLREIIDRRGI CCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCC PVEIVADEWCNTLEDIKLFADHKAGHMVQIKTPDLGGINNVVEAVLYAKMKGIGAYLGGT CEEEECHHHHCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCC CNETDRSAQISVHLALATRPDQMLAKPGMGLDEGLMIVYNEMQRAIALLKRRGGK CCCCCCCEEEEEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1420191; 8454064; 8428631; 1397267 [H]