| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044422
Identifier: 78044422
GI number: 78044422
Start: 502479
End: 503858
Strand: Direct
Name: 78044422
Synonym: CHY_0583
Alternate gene names: NA
Gene position: 502479-503858 (Clockwise)
Preceding gene: 78045195
Following gene: 78043678
Centisome position: 20.92
GC content: 46.09
Gene sequence:
>1380_bases ATGGAAAAGGTGAAAATCCTATCCCCTACCGCTATTTTGGGGTACGGCTTTCCGGTTAAATCTTTTGAAGCTGGATTGGA AAAAAAGCCAGATGTTATCGCTGTTGATGCTGGTTCGGTCGACCCCGGACCGTATTATTTAGGAGCCGGAAAATCGTTTA CCCAGCGGGCTGCGGTAAAAAGGGACCTTTATTACATGCTTAAAGCTTGTGTGGAACTAAATATTCCGCTGTTAATTGGT ACTGCCGGGGGAGCCGGCGGCAGGGTTCATTTAATGGAAGTAGTAGAAATTATCAAAGAACTGGCTTTTGAAAATGATCT TTCCTTTAAAATGGCGGTTATTGATACCGAAATAGATAAAGAGTGGTTAAAAGATAAAGTTAGACAAAGGAAAACCAAAC CGTTAGGAAATTTACCGGATTTAACCATTGAGGAAATTGAGGAAGCGGTGCGGATTGTGGCCCAGGCGGGAATGGAGCCG TTTATCAAAGCGTTAAAAGCCGGTGCTCAGGTAATCGTGGCGGGAAGAGCTTTTGACCCGGCGGTTTTTGCTGCCTATCC GGTGGCCCACGGTTTTGATGTGGGTTTATCCCTGCATTTGGGGAAAATACTGGAATGTGCGGCGATTGCTACCGAACCGG GCAGCGGCAGCGACTGCTTGATGGGGGAACTTGACCGGGAAGGATTTGTAGTTTACCCCTTAAATCCCGAACGGCGGGCT ACACCCCTTTCGGTATCTGCCCATTCCCTTTATGAAAAAACTAGTCCCTTTGAGTTACACGGTCCGGGTGGTAAGCTTGA CCTCTCCCAGGTGAACTTTCAAGCAGTAGATGACCGGACGGTGAGGGTTACCGGTACTAAATTCATTAAAACCCCCAATT ACTACCTGAAAATTGAGGGCGTAAAAAGAGTAGGATTCCGGGCCATTAGCATTGCCGGCAGCAGGGACCCGAAATTTATT GAAAATTTCCAGTCCATAGCATCAGGGGTAAAAAAACGGGTGGAAGATAATTTTCCAGAACTTGCGGGAAAGTATTATCT AAACTTTATAGCTTACGGGATAAACGGTGTTATGGGGGCGTTAGAGCCGGAAAACAAGCTTTCCCATGAAATTGGGATTG TTATGGATGTGGTGGCGGAAGATAAAAATACTGCCGAACAGATATTAAGTTTTACCCGCAGTACCATGCTCCATTTTGGT TTTCCCGGGCGAATTTCCACCGCCGGAAATCTGGCGTTTTCCTTCTCTCCTTCGGATATTCCGGTTGGCGATGTTTATAA TTTCTCCATCCACCATTTGGTGGAAGTGGAAGATCCGGAAAAGCTTTTTCCCATCGAACACATTGAAATAGGAGGTAGAG GCGGTGGTAAAACTTATTGA
Upstream 100 bases:
>100_bases GTTAGCCAAACCCGGGATGGGGTTGGATGAAGGGTTAATGATTGTTTATAATGAAATGCAGCGAGCAATTGCCCTGTTAA AGAGGCGAGGAGGTAAATAA
Downstream 100 bases:
>100_bases TATTGCCAAAGTAATCCGGAGTAAAAACTCCGGACCTTTTGAGCTTACTTTTGACATTATTTTTAAAGATAAGGAAATTT ACGAAAAGGTTAAAGGGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MEKVKILSPTAILGYGFPVKSFEAGLEKKPDVIAVDAGSVDPGPYYLGAGKSFTQRAAVKRDLYYMLKACVELNIPLLIG TAGGAGGRVHLMEVVEIIKELAFENDLSFKMAVIDTEIDKEWLKDKVRQRKTKPLGNLPDLTIEEIEEAVRIVAQAGMEP FIKALKAGAQVIVAGRAFDPAVFAAYPVAHGFDVGLSLHLGKILECAAIATEPGSGSDCLMGELDREGFVVYPLNPERRA TPLSVSAHSLYEKTSPFELHGPGGKLDLSQVNFQAVDDRTVRVTGTKFIKTPNYYLKIEGVKRVGFRAISIAGSRDPKFI ENFQSIASGVKKRVEDNFPELAGKYYLNFIAYGINGVMGALEPENKLSHEIGIVMDVVAEDKNTAEQILSFTRSTMLHFG FPGRISTAGNLAFSFSPSDIPVGDVYNFSIHHLVEVEDPEKLFPIEHIEIGGRGGGKTY
Sequences:
>Translated_459_residues MEKVKILSPTAILGYGFPVKSFEAGLEKKPDVIAVDAGSVDPGPYYLGAGKSFTQRAAVKRDLYYMLKACVELNIPLLIG TAGGAGGRVHLMEVVEIIKELAFENDLSFKMAVIDTEIDKEWLKDKVRQRKTKPLGNLPDLTIEEIEEAVRIVAQAGMEP FIKALKAGAQVIVAGRAFDPAVFAAYPVAHGFDVGLSLHLGKILECAAIATEPGSGSDCLMGELDREGFVVYPLNPERRA TPLSVSAHSLYEKTSPFELHGPGGKLDLSQVNFQAVDDRTVRVTGTKFIKTPNYYLKIEGVKRVGFRAISIAGSRDPKFI ENFQSIASGVKKRVEDNFPELAGKYYLNFIAYGINGVMGALEPENKLSHEIGIVMDVVAEDKNTAEQILSFTRSTMLHFG FPGRISTAGNLAFSFSPSDIPVGDVYNFSIHHLVEVEDPEKLFPIEHIEIGGRGGGKTY >Mature_459_residues MEKVKILSPTAILGYGFPVKSFEAGLEKKPDVIAVDAGSVDPGPYYLGAGKSFTQRAAVKRDLYYMLKACVELNIPLLIG TAGGAGGRVHLMEVVEIIKELAFENDLSFKMAVIDTEIDKEWLKDKVRQRKTKPLGNLPDLTIEEIEEAVRIVAQAGMEP FIKALKAGAQVIVAGRAFDPAVFAAYPVAHGFDVGLSLHLGKILECAAIATEPGSGSDCLMGELDREGFVVYPLNPERRA TPLSVSAHSLYEKTSPFELHGPGGKLDLSQVNFQAVDDRTVRVTGTKFIKTPNYYLKIEGVKRVGFRAISIAGSRDPKFI ENFQSIASGVKKRVEDNFPELAGKYYLNFIAYGINGVMGALEPENKLSHEIGIVMDVVAEDKNTAEQILSFTRSTMLHFG FPGRISTAGNLAFSFSPSDIPVGDVYNFSIHHLVEVEDPEKLFPIEHIEIGGRGGGKTY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50027; Mature: 50027
Theoretical pI: Translated: 6.04; Mature: 6.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVKILSPTAILGYGFPVKSFEAGLEKKPDVIAVDAGSVDPGPYYLGAGKSFTQRAAVK CCCEEEECCCEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHH RDLYYMLKACVELNIPLLIGTAGGAGGRVHLMEVVEIIKELAFENDLSFKMAVIDTEIDK HHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECHHHH EWLKDKVRQRKTKPLGNLPDLTIEEIEEAVRIVAQAGMEPFIKALKAGAQVIVAGRAFDP HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCC AVFAAYPVAHGFDVGLSLHLGKILECAAIATEPGSGSDCLMGELDREGFVVYPLNPERRA HHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCEEEEECCCCCCC TPLSVSAHSLYEKTSPFELHGPGGKLDLSQVNFQAVDDRTVRVTGTKFIKTPNYYLKIEG CCCEEHHHHHHHCCCCEEEECCCCEEEHHHCCEEEECCCEEEEECCEEEECCCEEEEEEC VKRVGFRAISIAGSRDPKFIENFQSIASGVKKRVEDNFPELAGKYYLNFIAYGINGVMGA CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC LEPENKLSHEIGIVMDVVAEDKNTAEQILSFTRSTMLHFGFPGRISTAGNLAFSFSPSDI CCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCC PVGDVYNFSIHHLVEVEDPEKLFPIEHIEIGGRGGGKTY CCCCEECCEEEEEEEECCCCHHCCEEEEEECCCCCCCCC >Mature Secondary Structure MEKVKILSPTAILGYGFPVKSFEAGLEKKPDVIAVDAGSVDPGPYYLGAGKSFTQRAAVK CCCEEEECCCEEEECCCCHHHHHHCCCCCCCEEEEECCCCCCCCEEEECCCCHHHHHHHH RDLYYMLKACVELNIPLLIGTAGGAGGRVHLMEVVEIIKELAFENDLSFKMAVIDTEIDK HHHHHHHHHHHHCCCCEEEECCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEEEECHHHH EWLKDKVRQRKTKPLGNLPDLTIEEIEEAVRIVAQAGMEPFIKALKAGAQVIVAGRAFDP HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCC AVFAAYPVAHGFDVGLSLHLGKILECAAIATEPGSGSDCLMGELDREGFVVYPLNPERRA HHHHHCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCEEECCCCCCEEEEECCCCCCC TPLSVSAHSLYEKTSPFELHGPGGKLDLSQVNFQAVDDRTVRVTGTKFIKTPNYYLKIEG CCCEEHHHHHHHCCCCEEEECCCCEEEHHHCCEEEECCCEEEEECCEEEECCCEEEEEEC VKRVGFRAISIAGSRDPKFIENFQSIASGVKKRVEDNFPELAGKYYLNFIAYGINGVMGA CCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC LEPENKLSHEIGIVMDVVAEDKNTAEQILSFTRSTMLHFGFPGRISTAGNLAFSFSPSDI CCCCHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEECCCCC PVGDVYNFSIHHLVEVEDPEKLFPIEHIEIGGRGGGKTY CCCCEECCEEEEEEEECCCCHHCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA