Click here to switch to the map view.

The map label for this gene is ycbC [C]

Identifier: 78045108

GI number: 78045108

Start: 1875010

End: 1875621

Strand: Direct

Name: ycbC [C]

Synonym: CHY_2090

Alternate gene names: 78045108

Gene position: 1875010-1875621 (Clockwise)

Preceding gene: 78045055

Following gene: 78043103

Centisome position: 78.08

GC content: 42.16

Gene sequence:

>612_bases
ATGAACTTCAAAAAGATTATTTTTGCATTCTTTGGACTTACCTTAATTTTTTTAATCGCCGCCTGGTTTTTCCCGTTAAA
TTACTATCTTGCCTTACCCTTAACAATTAAGGAAAATCCTCAACCAGCCGATGCCGTCGTGGTTTTAAGCGGGGGCCTTA
CCAAGAAGGGAGATTTAGGCGAGAGTACCAGGGAAAGGTTAAATTTAGGTATTAACCTCTGGAAAAACGATTACGGACGC
TATCTTTTGCTGTCAGGAGGCAGTTTTACCAGAGAGCCAAAAGACGCCAGCCTCATGGCCAAAGAAGCGCTAAAAAAAGG
TGTTCCCGCTCCGGCTCTTTTACTGGAGAGCAGTAGCGAAAACACCTACGAAAACGTTTTATTAACCGCAAATATTTATT
ATCAGAACCGCTGGAAAAGAATTTTAGTGGTCACCTCTGCCTATCATACTTTGCGGGTTAAAAAAATGTATAACGACCGG
GGGGTTAACGCCACCGTTGTCTACCCCGCCGGTGAACTGCCAAACGCCCGCGGATTGTTAAGATTAAGGCAAACTATAGT
AGTTGTTGAAGAATATTTAAAGTTACTCTACTACTTTATTGGTAAGCTTTAG

Upstream 100 bases:

>100_bases
GGCCTCCATCCTACCCCTCCAAAAGCTCTAATTTATAAAAATTTATGCGAAAAAAAGGTTTTTTTGCCTAAAAAATAGAA
TCTTTTTTCCGGGTGAGAAC

Downstream 100 bases:

>100_bases
TTTTTTTATTTTATTGCGCAAGGTAGTATGGGTTACCCCCAAACTTCTGGCTGCCTGCCTGATGGAAGGATACTGTTTTA
AAGCCCTTTCAATAAGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MNFKKIIFAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLGESTRERLNLGINLWKNDYGR
YLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSENTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDR
GVNATVVYPAGELPNARGLLRLRQTIVVVEEYLKLLYYFIGKL

Sequences:

>Translated_203_residues
MNFKKIIFAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLGESTRERLNLGINLWKNDYGR
YLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSENTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDR
GVNATVVYPAGELPNARGLLRLRQTIVVVEEYLKLLYYFIGKL
>Mature_203_residues
MNFKKIIFAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLGESTRERLNLGINLWKNDYGR
YLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSENTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDR
GVNATVVYPAGELPNARGLLRLRQTIVVVEEYLKLLYYFIGKL

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23017; Mature: 23017

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFKKIIFAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC
ESTRERLNLGINLWKNDYGRYLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSE
HHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
NTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDRGVNATVVYPAGELPNARGLL
CCEEEEEEEEEEEEECCCEEEEEEEECHHHHHEEEHHCCCCCEEEEEECCCCCCCHHHHH
RLRQTIVVVEEYLKLLYYFIGKL
HHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNFKKIIFAFFGLTLIFLIAAWFFPLNYYLALPLTIKENPQPADAVVVLSGGLTKKGDLG
CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEECCCCCCCCEEEEEECCCCCCCCCC
ESTRERLNLGINLWKNDYGRYLLLSGGSFTREPKDASLMAKEALKKGVPAPALLLESSSE
HHHHHHHHCCEEEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCC
NTYENVLLTANIYYQNRWKRILVVTSAYHTLRVKKMYNDRGVNATVVYPAGELPNARGLL
CCEEEEEEEEEEEEECCCEEEEEEEECHHHHHEEEHHCCCCCEEEEEECCCCCCCHHHHH
RLRQTIVVVEEYLKLLYYFIGKL
HHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA