Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

Click here to switch to the map view.

The map label for this gene is 78044972

Identifier: 78044972

GI number: 78044972

Start: 118763

End: 119101

Strand: Direct

Name: 78044972

Synonym: CHY_0136

Alternate gene names: NA

Gene position: 118763-119101 (Clockwise)

Preceding gene: 78043440

Following gene: 78044420

Centisome position: 4.95

GC content: 36.28

Gene sequence:

>339_bases
ATGAACGCCAGCCGTACTGCTGAATTAAATATAAGGTTGACCGAATTTGAAGTACCGCCTGTTCAGGATTTTCTGGTCAT
AGGAAAACGGGCTCCAATTGGTATTGAAGCTTTTGGCAAAATGGTTGAATTTATTTCCCCCAACCAGTATAAGGCTATTC
GGCTGAATCACGAAAAATTTGAAGGGATAATTATTAGAAAAAATTTCCTCAATGTAATGGAGGAAGAGTTATTGATATCG
GCAATCTTAGTAGAAGTGGATGCCATTTCCGATGAAAGTTCCATTTTCAAGGGAAGTTTAAACATAATGCTTAATATCAA
AAAGGAGATTGAAATATGA

Upstream 100 bases:

>100_bases
TTAAAATTAAAGGGGAAGGTCTGACATAATTGCCAAAGAGTGGGGCGGTAAACGAAAATTAAAAGAAAGGGGGAAGCGGT
TTTAAAAACCGCTTTGGGAA

Downstream 100 bases:

>100_bases
TTAAACAAGTACGGGAAGTAATGACCAGAAATCCGGTAACCATTGAGCCGTACAGGAGCTTATGGGATGCCAAGGAACTT
ATGCGTTCGCAAAGGATTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNASRTAELNIRLTEFEVPPVQDFLVIGKRAPIGIEAFGKMVEFISPNQYKAIRLNHEKFEGIIIRKNFLNVMEEELLIS
AILVEVDAISDESSIFKGSLNIMLNIKKEIEI

Sequences:

>Translated_112_residues
MNASRTAELNIRLTEFEVPPVQDFLVIGKRAPIGIEAFGKMVEFISPNQYKAIRLNHEKFEGIIIRKNFLNVMEEELLIS
AILVEVDAISDESSIFKGSLNIMLNIKKEIEI
>Mature_112_residues
MNASRTAELNIRLTEFEVPPVQDFLVIGKRAPIGIEAFGKMVEFISPNQYKAIRLNHEKFEGIIIRKNFLNVMEEELLIS
AILVEVDAISDESSIFKGSLNIMLNIKKEIEI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12734; Mature: 12734

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNASRTAELNIRLTEFEVPPVQDFLVIGKRAPIGIEAFGKMVEFISPNQYKAIRLNHEKF
CCCCCEEEEEEEEEEECCCCCCHHEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH
EGIIIRKNFLNVMEEELLISAILVEVDAISDESSIFKGSLNIMLNIKKEIEI
CEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECEEEEEEEEEEECCC
>Mature Secondary Structure
MNASRTAELNIRLTEFEVPPVQDFLVIGKRAPIGIEAFGKMVEFISPNQYKAIRLNHEKF
CCCCCEEEEEEEEEEECCCCCCHHEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCCHH
EGIIIRKNFLNVMEEELLISAILVEVDAISDESSIFKGSLNIMLNIKKEIEI
CEEEEEHHHHHHHHHHHHHHHHHHHEECCCCCCCEEECEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA