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The map label for this gene is yqeZ [H]

Identifier: 78044964

GI number: 78044964

Start: 759400

End: 760692

Strand: Direct

Name: yqeZ [H]

Synonym: CHY_0856

Alternate gene names: 78044964

Gene position: 759400-760692 (Clockwise)

Preceding gene: 78043053

Following gene: 78044579

Centisome position: 31.62

GC content: 45.48

Gene sequence:

>1293_bases
GTGGGGAAATTCAGGGGAAAAATTATCTTTTGGCTTATGGTTTTTCTCTGGTTGACGACTCCCGTTTATGCCGGTGTTCT
GGCTACCAGGGTTGAGGGTGTCATTGACCCGGTAATAGCGGGGCACCTTAAGGAAATAATCCAAAAAGCAGAGCGGGAAG
AAGCAAGCTTTGTCTTAATTGAACTTAATACTCCCGGTGGTCTTGATACTTCTATGCGGGAGATAACTTCTGCGATTTTA
GCTGCAAAAGTACCGGTGGGAGTCTGGGTTGGTCCTTCCGGAGCCAGGGCGGCTTCTGCCGGAACATTTATTTTATACAG
TGCTCAGGTAGCGGCAATGGCTCCGCAAACCACTATCGGGTCTGCTCATCCGGTAAATCTCGGGGGACAGTCCCTGGATC
AGGATTTGCGGGCCAAGGTGGAAAACGATGCGGTTTCTTATATTACTTCCCTGGCAAAAAGGAATGGAAGAAACCCTGTT
TGGGCGGAAGAAGCGGTTAGAAAAAGTGTTTCGGTGGATGCGGAGGAAGCTTATAAAAAGGGAATAATAAATTTTATTGC
TAAAAACCCGGAAGAATTTTTAGAAAAAGCCCATGGGCTCCGGGTAAAAGTTTCCGGCAGCGAATTAGTCTTAAATTTAA
AGGGGCAAAGGATAAAATATCTTGATTTAAGCTTGTGGGAAAAATTTTTACATGCTTTGGCCAATCCTGAGCTTGCCTAT
TTTCTTATTTTGGTTGGAATTTACGGTCTAATTTACGAGTTTGCCCATCCCGGAGGGATGGTTGGCGGGATAACGGGGGT
TCTTGCTTTACTCATGGCTTTTTATAGCCTTTCCGTTTTGCCGACTACTCTAACGGGCCTTTTATTGCTTCTTTTTGGTT
TGGCTTTAATCATTGCCGAACTTTATTTGCCGACTTTTGGAGCACTGGGAGTGGGAGGGGTGATTAGCATTACTCTTGGT
TCGCTGTTTCTTTTTGGCACCGATTTACCGGGGTTAACCATTAGCTGGGTTAATATTCTCCCGCTGGTTTTGCTTTTAGC
TTTAGGAGTATACCTGTTAATTAAACTTGCGGTTCGGGCGCAGAAAAGTAAAAGTTTAACAGGAATGGAGGGGATGATCG
GCCTTACTGGTAAAGTTACCGCGGATCTTCAACCGGAAGGATTTGTAATGGTAAGGGGGGAAATCTGGAAAGCAAAAGCG
GTGGAAGGTAAAACCATACCACGGGGTACACCGGTAAAGGTGATAGGGGTTAACGGGTTGACCCTGGTGGTGGATGAGGT
TAACGAAAGTTAA

Upstream 100 bases:

>100_bases
CAAAGGCCTGAAGTCATGCCCCAAAATTTTGGGGCATTTTTTATTTGTGGTGGCAGGATAAATTCATTGTGGTATAATAA
GCCAAAAGGGGAGGATTTTG

Downstream 100 bases:

>100_bases
AATAACTTTTCTGGAGGGATGTAAATGGAGATTATTGGTGCCCTTTTAGGGGCAATGGGCCCGCTTCTGGTTTTAATCCT
GTTTTTTCTTTTCTCGGCCG

Product: nodulation efficiency family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MGKFRGKIIFWLMVFLWLTTPVYAGVLATRVEGVIDPVIAGHLKEIIQKAEREEASFVLIELNTPGGLDTSMREITSAIL
AAKVPVGVWVGPSGARAASAGTFILYSAQVAAMAPQTTIGSAHPVNLGGQSLDQDLRAKVENDAVSYITSLAKRNGRNPV
WAEEAVRKSVSVDAEEAYKKGIINFIAKNPEEFLEKAHGLRVKVSGSELVLNLKGQRIKYLDLSLWEKFLHALANPELAY
FLILVGIYGLIYEFAHPGGMVGGITGVLALLMAFYSLSVLPTTLTGLLLLLFGLALIIAELYLPTFGALGVGGVISITLG
SLFLFGTDLPGLTISWVNILPLVLLLALGVYLLIKLAVRAQKSKSLTGMEGMIGLTGKVTADLQPEGFVMVRGEIWKAKA
VEGKTIPRGTPVKVIGVNGLTLVVDEVNES

Sequences:

>Translated_430_residues
MGKFRGKIIFWLMVFLWLTTPVYAGVLATRVEGVIDPVIAGHLKEIIQKAEREEASFVLIELNTPGGLDTSMREITSAIL
AAKVPVGVWVGPSGARAASAGTFILYSAQVAAMAPQTTIGSAHPVNLGGQSLDQDLRAKVENDAVSYITSLAKRNGRNPV
WAEEAVRKSVSVDAEEAYKKGIINFIAKNPEEFLEKAHGLRVKVSGSELVLNLKGQRIKYLDLSLWEKFLHALANPELAY
FLILVGIYGLIYEFAHPGGMVGGITGVLALLMAFYSLSVLPTTLTGLLLLLFGLALIIAELYLPTFGALGVGGVISITLG
SLFLFGTDLPGLTISWVNILPLVLLLALGVYLLIKLAVRAQKSKSLTGMEGMIGLTGKVTADLQPEGFVMVRGEIWKAKA
VEGKTIPRGTPVKVIGVNGLTLVVDEVNES
>Mature_429_residues
GKFRGKIIFWLMVFLWLTTPVYAGVLATRVEGVIDPVIAGHLKEIIQKAEREEASFVLIELNTPGGLDTSMREITSAILA
AKVPVGVWVGPSGARAASAGTFILYSAQVAAMAPQTTIGSAHPVNLGGQSLDQDLRAKVENDAVSYITSLAKRNGRNPVW
AEEAVRKSVSVDAEEAYKKGIINFIAKNPEEFLEKAHGLRVKVSGSELVLNLKGQRIKYLDLSLWEKFLHALANPELAYF
LILVGIYGLIYEFAHPGGMVGGITGVLALLMAFYSLSVLPTTLTGLLLLLFGLALIIAELYLPTFGALGVGGVISITLGS
LFLFGTDLPGLTISWVNILPLVLLLALGVYLLIKLAVRAQKSKSLTGMEGMIGLTGKVTADLQPEGFVMVRGEIWKAKAV
EGKTIPRGTPVKVIGVNGLTLVVDEVNES

Specific function: Unknown

COG id: COG1030

COG function: function code O; Membrane-bound serine protease (ClpP class)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002810
- InterPro:   IPR002825 [H]

Pfam domain/function: PF01972 DUF114; PF01957 NfeD [H]

EC number: NA

Molecular weight: Translated: 46020; Mature: 45889

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKFRGKIIFWLMVFLWLTTPVYAGVLATRVEGVIDPVIAGHLKEIIQKAEREEASFVLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
ELNTPGGLDTSMREITSAILAAKVPVGVWVGPSGARAASAGTFILYSAQVAAMAPQTTIG
EECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECHHHHHCCCCCCC
SAHPVNLGGQSLDQDLRAKVENDAVSYITSLAKRNGRNPVWAEEAVRKSVSVDAEEAYKK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHH
GIINFIAKNPEEFLEKAHGLRVKVSGSELVLNLKGQRIKYLDLSLWEKFLHALANPELAY
HHHHHHHCCHHHHHHHHCCCEEEECCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCHHHH
FLILVGIYGLIYEFAHPGGMVGGITGVLALLMAFYSLSVLPTTLTGLLLLLFGLALIIAE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLPTFGALGVGGVISITLGSLFLFGTDLPGLTISWVNILPLVLLLALGVYLLIKLAVRA
HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKSKSLTGMEGMIGLTGKVTADLQPEGFVMVRGEIWKAKAVEGKTIPRGTPVKVIGVNGL
HHCCCCCCCCCCEECCCEEEECCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEECCCE
TLVVDEVNES
EEEEECCCCC
>Mature Secondary Structure 
GKFRGKIIFWLMVFLWLTTPVYAGVLATRVEGVIDPVIAGHLKEIIQKAEREEASFVLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
ELNTPGGLDTSMREITSAILAAKVPVGVWVGPSGARAASAGTFILYSAQVAAMAPQTTIG
EECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCEEEEEECHHHHHCCCCCCC
SAHPVNLGGQSLDQDLRAKVENDAVSYITSLAKRNGRNPVWAEEAVRKSVSVDAEEAYKK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHH
GIINFIAKNPEEFLEKAHGLRVKVSGSELVLNLKGQRIKYLDLSLWEKFLHALANPELAY
HHHHHHHCCHHHHHHHHCCCEEEECCCEEEEEECCCEEEEEEHHHHHHHHHHHCCCHHHH
FLILVGIYGLIYEFAHPGGMVGGITGVLALLMAFYSLSVLPTTLTGLLLLLFGLALIIAE
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYLPTFGALGVGGVISITLGSLFLFGTDLPGLTISWVNILPLVLLLALGVYLLIKLAVRA
HHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKSKSLTGMEGMIGLTGKVTADLQPEGFVMVRGEIWKAKAVEGKTIPRGTPVKVIGVNGL
HHCCCCCCCCCCEECCCEEEECCCCCCEEEEECCEEEEECCCCCCCCCCCCEEEEECCCE
TLVVDEVNES
EEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]