Definition Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome.
Accession NC_007503
Length 2,401,520

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The map label for this gene is 78044725

Identifier: 78044725

GI number: 78044725

Start: 804481

End: 804924

Strand: Direct

Name: 78044725

Synonym: CHY_0911

Alternate gene names: NA

Gene position: 804481-804924 (Clockwise)

Preceding gene: 78043115

Following gene: 78043370

Centisome position: 33.5

GC content: 40.99

Gene sequence:

>444_bases
ATGTCGATAAAGTATAACGAAGTGATCGGCTTTTATCCATGTTTAAAGCCGGGAGTTGGTGAAGGAACGATGGTGGTAAT
GAAAGGCGGGGATGAGGTGTTTCTCCCGAAAAGTATTAAAAGCTTTCGACGAGAAATATTGTGGTATTATTTTGTGGATT
TTAAAGCCTTAAGGAGTATGGCCAGAGCTTTAGGGGAGCCGGTACCTTTGGTTCTGGGGGAACGGGTGTTCGTTCCCTTA
AAATTTCGCCACCGTGCTTTTGCCGGGGATTTTTGTTATGGTTATTTTTCTCTGGATGAAATTGTTTTTTGCGGTGGGAA
GGGGAAAGCAGCAATTATTTTAAGTTGCGGTAAAAAATATGGTTTAGCTTGCCGGGTAAAAACAGCAACTGCTTCGTTAA
TAAGGGCAAAAATCTTTCGTTTGGAGATAAGTTTCAGAAAATAA

Upstream 100 bases:

>100_bases
TTTTAATTTTGAATTTGATTAAAACTCCCTTAAATCCTCCCTTTTTGCTACACGAAAACCTCCCCCGGGCAAAAGTAAAT
TGCTGGGCGGAGGTGTTTTT

Downstream 100 bases:

>100_bases
GTTATTTTTTTCACCAGGCAGGAAATTAAAAAAATAAAGAGAAAAATATGAAAATTAAGAATATATATAATATTAGTAAA
AAAGATTTAAATTGTATAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSMARALGEPVPLVLGERVFVPL
KFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKYGLACRVKTATASLIRAKIFRLEISFRK

Sequences:

>Translated_147_residues
MSIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSMARALGEPVPLVLGERVFVPL
KFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKYGLACRVKTATASLIRAKIFRLEISFRK
>Mature_146_residues
SIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSMARALGEPVPLVLGERVFVPLK
FRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKYGLACRVKTATASLIRAKIFRLEISFRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16570; Mature: 16439

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSM
CCEECCCEEEECCCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
ARALGEPVPLVLGERVFVPLKFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKY
HHHHCCCCCEEECCEEEEEEEECCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCC
GLACRVKTATASLIRAKIFRLEISFRK
CEEEEEEHHHHHHHHHEEEEEEEEECC
>Mature Secondary Structure 
SIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSM
CEECCCEEEECCCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH
ARALGEPVPLVLGERVFVPLKFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKY
HHHHCCCCCEEECCEEEEEEEECCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCC
GLACRVKTATASLIRAKIFRLEISFRK
CEEEEEEHHHHHHHHHEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA