| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044725
Identifier: 78044725
GI number: 78044725
Start: 804481
End: 804924
Strand: Direct
Name: 78044725
Synonym: CHY_0911
Alternate gene names: NA
Gene position: 804481-804924 (Clockwise)
Preceding gene: 78043115
Following gene: 78043370
Centisome position: 33.5
GC content: 40.99
Gene sequence:
>444_bases ATGTCGATAAAGTATAACGAAGTGATCGGCTTTTATCCATGTTTAAAGCCGGGAGTTGGTGAAGGAACGATGGTGGTAAT GAAAGGCGGGGATGAGGTGTTTCTCCCGAAAAGTATTAAAAGCTTTCGACGAGAAATATTGTGGTATTATTTTGTGGATT TTAAAGCCTTAAGGAGTATGGCCAGAGCTTTAGGGGAGCCGGTACCTTTGGTTCTGGGGGAACGGGTGTTCGTTCCCTTA AAATTTCGCCACCGTGCTTTTGCCGGGGATTTTTGTTATGGTTATTTTTCTCTGGATGAAATTGTTTTTTGCGGTGGGAA GGGGAAAGCAGCAATTATTTTAAGTTGCGGTAAAAAATATGGTTTAGCTTGCCGGGTAAAAACAGCAACTGCTTCGTTAA TAAGGGCAAAAATCTTTCGTTTGGAGATAAGTTTCAGAAAATAA
Upstream 100 bases:
>100_bases TTTTAATTTTGAATTTGATTAAAACTCCCTTAAATCCTCCCTTTTTGCTACACGAAAACCTCCCCCGGGCAAAAGTAAAT TGCTGGGCGGAGGTGTTTTT
Downstream 100 bases:
>100_bases GTTATTTTTTTCACCAGGCAGGAAATTAAAAAAATAAAGAGAAAAATATGAAAATTAAGAATATATATAATATTAGTAAA AAAGATTTAAATTGTATAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSMARALGEPVPLVLGERVFVPL KFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKYGLACRVKTATASLIRAKIFRLEISFRK
Sequences:
>Translated_147_residues MSIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSMARALGEPVPLVLGERVFVPL KFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKYGLACRVKTATASLIRAKIFRLEISFRK >Mature_146_residues SIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSMARALGEPVPLVLGERVFVPLK FRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKYGLACRVKTATASLIRAKIFRLEISFRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16570; Mature: 16439
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSM CCEECCCEEEECCCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH ARALGEPVPLVLGERVFVPLKFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKY HHHHCCCCCEEECCEEEEEEEECCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCC GLACRVKTATASLIRAKIFRLEISFRK CEEEEEEHHHHHHHHHEEEEEEEEECC >Mature Secondary Structure SIKYNEVIGFYPCLKPGVGEGTMVVMKGGDEVFLPKSIKSFRREILWYYFVDFKALRSM CEECCCEEEECCCCCCCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHHHHHHHH ARALGEPVPLVLGERVFVPLKFRHRAFAGDFCYGYFSLDEIVFCGGKGKAAIILSCGKKY HHHHCCCCCEEECCEEEEEEEECCCCCCCCEEEEEEECCCEEEECCCCCEEEEEECCCCC GLACRVKTATASLIRAKIFRLEISFRK CEEEEEEHHHHHHHHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA