| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044533
Identifier: 78044533
GI number: 78044533
Start: 1170915
End: 1171298
Strand: Direct
Name: 78044533
Synonym: CHY_1315
Alternate gene names: NA
Gene position: 1170915-1171298 (Clockwise)
Preceding gene: 78043633
Following gene: 78044300
Centisome position: 48.76
GC content: 34.11
Gene sequence:
>384_bases TTGGGATCTGTACGCATAATAGCTTATATAGATAAGACGGTAGTAAAAATTGTAGGATTTAAAATTGATAGAATTAATTT AATGGAAATTGAAAAAAAATTAATAGAAATATTAAAACGACCGGTGCGTGTAATTGGTGTTAGCGGAGAAAGTTTGGAAT TTGATGTTTATGAATTGCCTCCGGAACAGGTTTATAGGAATGAACGTAATATTATTGAGGCTATTGCAAATGAAGGTATA GAGGGGGTTGAAGTGGCAAAAATTGTTAAAGCCGAGCAGGTTCCGGAGGTTAATCTTGATGATTTAATATTAAAACCTGA TGAAGAATATAATTGTCCAGCGGAAAGGTGGTTGCGATGGAAAAAGCTGGAGGAAGAGAAATAA
Upstream 100 bases:
>100_bases ATGATTACCAGGCTTGCTGATATAGAGAAAAAGAAAAAGTTTGCCTTGCGGTTAGCTGGAATTGGTGAGCAAGAAAATGA GCGATTGGAGTGAACATTGA
Downstream 100 bases:
>100_bases AAAGTTATAACTTTTATGTTGACTTTGAGCCTATTGTGGCGCTAGTTAAAGATACGGTAATTCCCAAGATGTATAAAGTC AGGCAAAAGTTTGATGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MGSVRIIAYIDKTVVKIVGFKIDRINLMEIEKKLIEILKRPVRVIGVSGESLEFDVYELPPEQVYRNERNIIEAIANEGI EGVEVAKIVKAEQVPEVNLDDLILKPDEEYNCPAERWLRWKKLEEEK
Sequences:
>Translated_127_residues MGSVRIIAYIDKTVVKIVGFKIDRINLMEIEKKLIEILKRPVRVIGVSGESLEFDVYELPPEQVYRNERNIIEAIANEGI EGVEVAKIVKAEQVPEVNLDDLILKPDEEYNCPAERWLRWKKLEEEK >Mature_126_residues GSVRIIAYIDKTVVKIVGFKIDRINLMEIEKKLIEILKRPVRVIGVSGESLEFDVYELPPEQVYRNERNIIEAIANEGIE GVEVAKIVKAEQVPEVNLDDLILKPDEEYNCPAERWLRWKKLEEEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14748; Mature: 14617
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVRIIAYIDKTVVKIVGFKIDRINLMEIEKKLIEILKRPVRVIGVSGESLEFDVYELP CCCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEECCCCCEEEEEEECC PEQVYRNERNIIEAIANEGIEGVEVAKIVKAEQVPEVNLDDLILKPDEEYNCPAERWLRW HHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHH KKLEEEK HHHCCCC >Mature Secondary Structure GSVRIIAYIDKTVVKIVGFKIDRINLMEIEKKLIEILKRPVRVIGVSGESLEFDVYELP CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHEEECCCCCEEEEEEECC PEQVYRNERNIIEAIANEGIEGVEVAKIVKAEQVPEVNLDDLILKPDEEYNCPAERWLRW HHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHH KKLEEEK HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA