| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044376
Identifier: 78044376
GI number: 78044376
Start: 275376
End: 276278
Strand: Direct
Name: 78044376
Synonym: CHY_0313
Alternate gene names: NA
Gene position: 275376-276278 (Clockwise)
Preceding gene: 78043784
Following gene: 78042648
Centisome position: 11.47
GC content: 41.31
Gene sequence:
>903_bases ATGAACATTTATCCCCATGAATATCTTTTAAAAGCGGTTTATTTTGCCCCCCGGGGCAAACACCGGCTTATGGCTTTAGG TTCGGTTTTGGCCGAGAGATATTTAAGCCCCAAGGATAAGCTGGTAGGGCTAATTGGTGATGCTGGAGCCGGCAAATCTT TATTAATTCGCGGGATGTTTCCGGGATTAGAGCTAACCAATGATGATGAAGGGATAAATTTGCGGCCATTACCGTTACTG GAAGATTATGAACGGGGAAATTTTCGCCACCATTCGTATCACGTGGATATGCGCTTTGAAATGGCTTTTACTCCGCCGTA CCGTTTAGCCGAGGCGGTTAAAAAAGCTATCGATAAAGGACGGCGGGTAGTAATTGAACATTTTGATTTGCTGTATCCCT ATCTAAATATTAATGCCGAGCTTTTAATCGGGATTGGTGCTGAAGTGATTTTATTTCGTCCCAATGTTTTTGGACCCTTT CCCCATGAGGTGGCCAATGAAGTGTTTCCCTCTTTGGTTTACCGGAAAATGGCCCATTCGGCGGAAGACCTGACCGGTTA TGTTTTAAAAGAAATGGGGATTATCAAACCGGAGGTTCACAGTGATATCCGTAACGGTTTCTTACTGGAGTTTAAAGAAA AGCCCGAAATAGATTTGGAGGTTTTGGAAAAAAGGGTAAAAGAATTAATTGCTCAAAATCTCTCAATTTGCTATTATGAT GAAGAACATATCAAGCTTGGCCAGGAAAAGGTTGAATGCACCGGCCCAAGGATTCATGTTTCCAAAACCGGTGAAATCAA AGGTTTTAAAATACTTAAAGAATTAAAATACGATCCTATTGAAAAACTTTATATAATTGCCGGGGTTGTTGGTCAGCAGG ACAACGAAAATGAGGTGATTTAA
Upstream 100 bases:
>100_bases TGACCCACTTCTGGCCCTTTTACGATGTTTTAATGCTTTTAGACGAGGTTAGGGAGATTTACCCCGGGGCCTTTGCCGTA CGGGAAGGAATGAGTATTGT
Downstream 100 bases:
>100_bases TGCGAATTGATGGTAGGGAAAAAGACCAGTTACGAACGGTTAAAATAACCACAAACTACATAAAACATGCTGAAGGTTCG GTTTTAATTGAAATGGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MNIYPHEYLLKAVYFAPRGKHRLMALGSVLAERYLSPKDKLVGLIGDAGAGKSLLIRGMFPGLELTNDDEGINLRPLPLL EDYERGNFRHHSYHVDMRFEMAFTPPYRLAEAVKKAIDKGRRVVIEHFDLLYPYLNINAELLIGIGAEVILFRPNVFGPF PHEVANEVFPSLVYRKMAHSAEDLTGYVLKEMGIIKPEVHSDIRNGFLLEFKEKPEIDLEVLEKRVKELIAQNLSICYYD EEHIKLGQEKVECTGPRIHVSKTGEIKGFKILKELKYDPIEKLYIIAGVVGQQDNENEVI
Sequences:
>Translated_300_residues MNIYPHEYLLKAVYFAPRGKHRLMALGSVLAERYLSPKDKLVGLIGDAGAGKSLLIRGMFPGLELTNDDEGINLRPLPLL EDYERGNFRHHSYHVDMRFEMAFTPPYRLAEAVKKAIDKGRRVVIEHFDLLYPYLNINAELLIGIGAEVILFRPNVFGPF PHEVANEVFPSLVYRKMAHSAEDLTGYVLKEMGIIKPEVHSDIRNGFLLEFKEKPEIDLEVLEKRVKELIAQNLSICYYD EEHIKLGQEKVECTGPRIHVSKTGEIKGFKILKELKYDPIEKLYIIAGVVGQQDNENEVI >Mature_300_residues MNIYPHEYLLKAVYFAPRGKHRLMALGSVLAERYLSPKDKLVGLIGDAGAGKSLLIRGMFPGLELTNDDEGINLRPLPLL EDYERGNFRHHSYHVDMRFEMAFTPPYRLAEAVKKAIDKGRRVVIEHFDLLYPYLNINAELLIGIGAEVILFRPNVFGPF PHEVANEVFPSLVYRKMAHSAEDLTGYVLKEMGIIKPEVHSDIRNGFLLEFKEKPEIDLEVLEKRVKELIAQNLSICYYD EEHIKLGQEKVECTGPRIHVSKTGEIKGFKILKELKYDPIEKLYIIAGVVGQQDNENEVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34287; Mature: 34287
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00132 CARBOXYPEPT_ZN_1 ; PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYPHEYLLKAVYFAPRGKHRLMALGSVLAERYLSPKDKLVGLIGDAGAGKSLLIRGMF CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEEECC PGLELTNDDEGINLRPLPLLEDYERGNFRHHSYHVDMRFEMAFTPPYRLAEAVKKAIDKG CCCEECCCCCCCCCCCCCCHHHHCCCCEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHCC RRVVIEHFDLLYPYLNINAELLIGIGAEVILFRPNVFGPFPHEVANEVFPSLVYRKMAHS CEEEHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC AEDLTGYVLKEMGIIKPEVHSDIRNGFLLEFKEKPEIDLEVLEKRVKELIAQNLSICYYD HHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEC EEHIKLGQEKVECTGPRIHVSKTGEIKGFKILKELKYDPIEKLYIIAGVVGQQDNENEVI HHHHHCCCHHEECCCCEEEEECCCCCHHHHHHHHCCCCCHHHEEEEEHHHCCCCCCCCCC >Mature Secondary Structure MNIYPHEYLLKAVYFAPRGKHRLMALGSVLAERYLSPKDKLVGLIGDAGAGKSLLIRGMF CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEEECC PGLELTNDDEGINLRPLPLLEDYERGNFRHHSYHVDMRFEMAFTPPYRLAEAVKKAIDKG CCCEECCCCCCCCCCCCCCHHHHCCCCEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHCC RRVVIEHFDLLYPYLNINAELLIGIGAEVILFRPNVFGPFPHEVANEVFPSLVYRKMAHS CEEEHHHHHHHHHHHCCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHC AEDLTGYVLKEMGIIKPEVHSDIRNGFLLEFKEKPEIDLEVLEKRVKELIAQNLSICYYD HHHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEEC EEHIKLGQEKVECTGPRIHVSKTGEIKGFKILKELKYDPIEKLYIIAGVVGQQDNENEVI HHHHHCCCHHEECCCCEEEEECCCCCHHHHHHHHCCCCCHHHEEEEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA