| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is pyrG
Identifier: 78044367
GI number: 78044367
Start: 108351
End: 109958
Strand: Direct
Name: pyrG
Synonym: CHY_0125
Alternate gene names: 78044367
Gene position: 108351-109958 (Clockwise)
Preceding gene: 78043915
Following gene: 78044938
Centisome position: 4.51
GC content: 45.27
Gene sequence:
>1608_bases ATGACGAAGTTTATTTTTGTGACCGGAGGAGTAGTTTCGTCACTGGGCAAAGGAATCACCGCAGCATCTTTAGGACGGCT TTTAAAAAGTCGCGGACTTAAAGTAGCAATTCAAAAATTTGACCCGTACATTAACGTTGACCCTGGTACCATGAGTCCGT ATCAGCATGGAGAAGTGTTTGTTACCGACGATGGAGCGGAAACCGACCTTGACCTTGGCCATTACGAACGGTTTATCGAT ATTAATTTAACCAAGAACTCCAACGTCACTACCGGTAAAGTTTACTGGGCGGTAATTAGCAAGGAACGGCGCGGGGATTA TCTCGGTGGTACCGTTCAGGTTATCCCGCACATTACCAATGAAATTAAAGAAAGGATATTGAGGGTAGCTAAAGAAAGCA ATCCCGATGTGGTGATAACCGAAATTGGCGGTACGGTTGGGGATATTGAATCCCTGCCTTTTTTAGAGGCAATAAGACAG CTAAAAAACGATGTGGGAAAAGACAATGTCCTGTACATTCACGTTACTCTGGTTCCTACTTTAAGGGTAACCGGCGAACT TAAGACCAAACCAACCCAGCACAGCGTCAAGGAATTGCGGAGCATCGGTATTCAACCGGATATAATTGTAGCCCGCTCGG AGCAGCCTTTATCCAGGGAAATCACCGAAAAAATTGCTCTCTTCTGTGATATTGATAAAAATGCCGTAATTCAGGCGGTG GATGCATCTAACATTTACGAGGTTCCTTTAAAGCTAAAAGAAGAAGGTTTGGATGATATTGTTATTAAAAAGTTAGGGCT TACCTGCGGAGAGCCGGATTTGTCGGAATGGGAACAAATCGTCGAGCGGTATAAAAACCCCAAATTTGAAGTAACTATTG GTATAGTTGGGAAGTACGTATCCCTTCCCGATGCTTATTTAAGTGTGGCCGAAGCTTTACGCCACGCCGGGATTTATCAT GAAACCCGGGTTAACATCCGCTGGATTGATTCGGAAATGCTGGAAAAAGAGCCGGTGGAAAAATATTTAAGTAACCTTGA TGGAATATTGGTTCCCGGAGGCTTTGGCGACCGGGGAGTTGAAGGGAAAATCAAGGCCATTCAGTATGCCCGGGAAAACA AAGTGCCTTATTTGGGCCTGTGTCTTGGCATGCAGACTGCCGTAATTGAGTTTGCCCGAAATGTGGCAGGCCTTAAGGAT GCCAATAGCTCTGAATTCAAACCGGATGGTCCCCATTCGGTAATTGACCTTTTGCCGGAACAAAAAGAAGTGGAACAGTT AGGAGGCACCATGCGTTTGGGATTATATCCGTGTAAGCTTGTTCCGGGGACAAAAGCTCATGCTGCTTACGGAGAAGAAA TTATTTACGAACGCCACCGGCACCGGTATGAGTTTAACAATGAGTACCGGGAATTATTAACCGGTTTAGGTCTGGTAATA AGTGGTACTTCTCCCGACGGCCGGCTGGTGGAAATAATAGAACTTTCGGACCATCCGTGGTTTGTGGCGACCCAGTTTCA CCCCGAATTTAAATCAAGACCCAATAGACCCCATCCGCTTTTCCGGGAGTTTATCGGGGCGAGTTTAAAAACCAATAAAT TGTTTTAG
Upstream 100 bases:
>100_bases GTTTCAGCTCCGGAGAAAATGTAACTTTTAGCTTGACTTTGGCTCTTTTGGCCGTATAGAATGGAAAAAGTGATTATTTG GTAGTATTGGGAGGATTAAG
Downstream 100 bases:
>100_bases GAGATAACCGGCTAACAGTTAGCCGGTAATTTTTTTAAAAAAAGTTAAGACAAAATTCGACATACAATGAAGGAAAATAA AAGTTTATGGCGAAATTACA
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase
Number of amino acids: Translated: 535; Mature: 534
Protein sequence:
>535_residues MTKFIFVTGGVVSSLGKGITAASLGRLLKSRGLKVAIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID INLTKNSNVTTGKVYWAVISKERRGDYLGGTVQVIPHITNEIKERILRVAKESNPDVVITEIGGTVGDIESLPFLEAIRQ LKNDVGKDNVLYIHVTLVPTLRVTGELKTKPTQHSVKELRSIGIQPDIIVARSEQPLSREITEKIALFCDIDKNAVIQAV DASNIYEVPLKLKEEGLDDIVIKKLGLTCGEPDLSEWEQIVERYKNPKFEVTIGIVGKYVSLPDAYLSVAEALRHAGIYH ETRVNIRWIDSEMLEKEPVEKYLSNLDGILVPGGFGDRGVEGKIKAIQYARENKVPYLGLCLGMQTAVIEFARNVAGLKD ANSSEFKPDGPHSVIDLLPEQKEVEQLGGTMRLGLYPCKLVPGTKAHAAYGEEIIYERHRHRYEFNNEYRELLTGLGLVI SGTSPDGRLVEIIELSDHPWFVATQFHPEFKSRPNRPHPLFREFIGASLKTNKLF
Sequences:
>Translated_535_residues MTKFIFVTGGVVSSLGKGITAASLGRLLKSRGLKVAIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFID INLTKNSNVTTGKVYWAVISKERRGDYLGGTVQVIPHITNEIKERILRVAKESNPDVVITEIGGTVGDIESLPFLEAIRQ LKNDVGKDNVLYIHVTLVPTLRVTGELKTKPTQHSVKELRSIGIQPDIIVARSEQPLSREITEKIALFCDIDKNAVIQAV DASNIYEVPLKLKEEGLDDIVIKKLGLTCGEPDLSEWEQIVERYKNPKFEVTIGIVGKYVSLPDAYLSVAEALRHAGIYH ETRVNIRWIDSEMLEKEPVEKYLSNLDGILVPGGFGDRGVEGKIKAIQYARENKVPYLGLCLGMQTAVIEFARNVAGLKD ANSSEFKPDGPHSVIDLLPEQKEVEQLGGTMRLGLYPCKLVPGTKAHAAYGEEIIYERHRHRYEFNNEYRELLTGLGLVI SGTSPDGRLVEIIELSDHPWFVATQFHPEFKSRPNRPHPLFREFIGASLKTNKLF >Mature_534_residues TKFIFVTGGVVSSLGKGITAASLGRLLKSRGLKVAIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDI NLTKNSNVTTGKVYWAVISKERRGDYLGGTVQVIPHITNEIKERILRVAKESNPDVVITEIGGTVGDIESLPFLEAIRQL KNDVGKDNVLYIHVTLVPTLRVTGELKTKPTQHSVKELRSIGIQPDIIVARSEQPLSREITEKIALFCDIDKNAVIQAVD ASNIYEVPLKLKEEGLDDIVIKKLGLTCGEPDLSEWEQIVERYKNPKFEVTIGIVGKYVSLPDAYLSVAEALRHAGIYHE TRVNIRWIDSEMLEKEPVEKYLSNLDGILVPGGFGDRGVEGKIKAIQYARENKVPYLGLCLGMQTAVIEFARNVAGLKDA NSSEFKPDGPHSVIDLLPEQKEVEQLGGTMRLGLYPCKLVPGTKAHAAYGEEIIYERHRHRYEFNNEYRELLTGLGLVIS GTSPDGRLVEIIELSDHPWFVATQFHPEFKSRPNRPHPLFREFIGASLKTNKLF
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain
Homologues:
Organism=Homo sapiens, GI148491070, Length=551, Percent_Identity=49.1833030852995, Blast_Score=514, Evalue=1e-146, Organism=Homo sapiens, GI28559085, Length=538, Percent_Identity=48.5130111524164, Blast_Score=505, Evalue=1e-143, Organism=Homo sapiens, GI28559083, Length=538, Percent_Identity=48.5130111524164, Blast_Score=505, Evalue=1e-143, Organism=Homo sapiens, GI221316689, Length=538, Percent_Identity=48.5130111524164, Blast_Score=505, Evalue=1e-143, Organism=Escherichia coli, GI1789142, Length=542, Percent_Identity=57.380073800738, Blast_Score=609, Evalue=1e-175, Organism=Caenorhabditis elegans, GI25148299, Length=609, Percent_Identity=41.5435139573071, Blast_Score=445, Evalue=1e-125, Organism=Saccharomyces cerevisiae, GI6319432, Length=558, Percent_Identity=45.3405017921147, Blast_Score=480, Evalue=1e-136, Organism=Saccharomyces cerevisiae, GI6322563, Length=551, Percent_Identity=45.5535390199637, Blast_Score=475, Evalue=1e-135, Organism=Drosophila melanogaster, GI24664469, Length=548, Percent_Identity=49.6350364963504, Blast_Score=514, Evalue=1e-146, Organism=Drosophila melanogaster, GI21357815, Length=493, Percent_Identity=48.0730223123732, Blast_Score=442, Evalue=1e-124,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): PYRG_CARHZ (Q3AFT7)
Other databases:
- EMBL: CP000141 - RefSeq: YP_358997.1 - HSSP: P17812 - ProteinModelPortal: Q3AFT7 - SMR: Q3AFT7 - STRING: Q3AFT7 - GeneID: 3727485 - GenomeReviews: CP000141_GR - KEGG: chy:CHY_0125 - NMPDR: fig|246194.3.peg.813 - TIGR: CHY_0125 - eggNOG: COG0504 - HOGENOM: HBG597806 - OMA: RVTMQKL - ProtClustDB: PRK05380 - BioCyc: CHYD246194:CHY_0125-MONOMER - HAMAP: MF_01227 - InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 - TIGRFAMs: TIGR00337
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase
EC number: =6.3.4.2
Molecular weight: Translated: 59725; Mature: 59594
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS51273 GATASE_TYPE_1; PS00442 GATASE_TYPE_I
Important sites: ACT_SITE 381-381 ACT_SITE 507-507 ACT_SITE 509-509
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFIFVTGGVVSSLGKGITAASLGRLLKSRGLKVAIQKFDPYINVDPGTMSPYQHGEVF CCEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFIDINLTKNSNVTTGKVYWAVISKERRGDYLGGTVQVIPHITN EECCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCEEEHHHHHH EIKERILRVAKESNPDVVITEIGGTVGDIESLPFLEAIRQLKNDVGKDNVLYIHVTLVPT HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEE LRVTGELKTKPTQHSVKELRSIGIQPDIIVARSEQPLSREITEKIALFCDIDKNAVIQAV EEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHEEEEEECCCCCEEEEE DASNIYEVPLKLKEEGLDDIVIKKLGLTCGEPDLSEWEQIVERYKNPKFEVTIGIVGKYV CCCCEEECCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECHH SLPDAYLSVAEALRHAGIYHETRVNIRWIDSEMLEKEPVEKYLSNLDGILVPGGFGDRGV CCCHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCC EGKIKAIQYARENKVPYLGLCLGMQTAVIEFARNVAGLKDANSSEFKPDGPHSVIDLLPE CCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC QKEVEQLGGTMRLGLYPCKLVPGTKAHAAYGEEIIYERHRHRYEFNNEYRELLTGLGLVI HHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEE SGTSPDGRLVEIIELSDHPWFVATQFHPEFKSRPNRPHPLFREFIGASLKTNKLF ECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure TKFIFVTGGVVSSLGKGITAASLGRLLKSRGLKVAIQKFDPYINVDPGTMSPYQHGEVF CEEEEEECHHHHHHCCCCHHHHHHHHHHHCCCEEEEECCCCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERFIDINLTKNSNVTTGKVYWAVISKERRGDYLGGTVQVIPHITN EECCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEEEEHHHCCCCCCCCEEEHHHHHH EIKERILRVAKESNPDVVITEIGGTVGDIESLPFLEAIRQLKNDVGKDNVLYIHVTLVPT HHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEEE LRVTGELKTKPTQHSVKELRSIGIQPDIIVARSEQPLSREITEKIALFCDIDKNAVIQAV EEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHEEEEEECCCCCEEEEE DASNIYEVPLKLKEEGLDDIVIKKLGLTCGEPDLSEWEQIVERYKNPKFEVTIGIVGKYV CCCCEEECCCHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEECHH SLPDAYLSVAEALRHAGIYHETRVNIRWIDSEMLEKEPVEKYLSNLDGILVPGGFGDRGV CCCHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCEEECCCCCCCCC EGKIKAIQYARENKVPYLGLCLGMQTAVIEFARNVAGLKDANSSEFKPDGPHSVIDLLPE CCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHCCC QKEVEQLGGTMRLGLYPCKLVPGTKAHAAYGEEIIYERHRHRYEFNNEYRELLTGLGLVI HHHHHHCCCEEEECEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEE SGTSPDGRLVEIIELSDHPWFVATQFHPEFKSRPNRPHPLFREFIGASLKTNKLF ECCCCCCCEEEEEEECCCCEEEEEEECCHHHCCCCCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA