| Definition | Carboxydothermus hydrogenoformans Z-2901 chromosome, complete genome. |
|---|---|
| Accession | NC_007503 |
| Length | 2,401,520 |
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The map label for this gene is 78044291
Identifier: 78044291
GI number: 78044291
Start: 798974
End: 800653
Strand: Direct
Name: 78044291
Synonym: CHY_0905
Alternate gene names: NA
Gene position: 798974-800653 (Clockwise)
Preceding gene: 78043913
Following gene: 78042876
Centisome position: 33.27
GC content: 37.62
Gene sequence:
>1680_bases ATGAATTTCAAATGGATAATTGAGAGTTACGGGGAATATTTAGAGCGGATAAGCCACAAGTTTCAGGATATATTAACCGA ACAAAATGGCGCCTTTATTTTGCTGGTTGAGGTTAGTGAAAGTAACAGATATGTATGCCGATTTTGTGAGTTTGCTGGAA ATGTGCCCTATGATTTAAAAAGGGAAATTAATGAAAAAGTTAATGGCAGTTTAATTCCGGGAAATCTCGATTGGCTTAAA ACATTAACCGAACCCCGGGTGTTAAACAAGGACCAGGTACAAAGCTATTTTCCCGAATTAAATCAAGTTGAAGTAATGCA GATTATACCTATTTATGTGGATAAAAACAGTAAAAATATAATGATTATTGGTTACTTTCAAGATTTGACTCCCTCAAGTA TCTCTTTTAATGTTAATGAACTTCAAAACTACCTTTATATTGAACAATTTTACAATCTAATTTTTGAAATAATAATAATG TTTAACAGAGTTATTGAAGAAAAAGAACCGCTGATCCGTGGGCATATGGAGCGAGTGGTGGAGTATGCTGACCTCATTGC CGGGGAAATCGGGCGTGAGGAAACCCAGCGCTTGATTTTACAAATAGCGGGAGCCGTGCATGATGTTGGAAAAATCATGG TACCGGATTTTATTTTACAGCACATCGGTAAGTACACCGAGGAAATGAGACAAAAGATGCAAAAACATTCGGAATTCGGT TATGAACTTTTAAAAAATCTACCGATGTTTAATGAGGTGGCCGAAGTTATTTTATACCATCATGAGCATTATGACGGCCA GGGGTATCCCAAAGGACTCAAAGGAAATGAAATTCCCCTTTATTCCCGGATATTGGCCATTGCCGACAGTTTTGATGCTA TGGTCAGTGAGCGGGTTTACAAGGTATCAATGGGTTATGATGAAGCATTAGAAGAACTGGTTAATAATAAAGGTAAGCAG TTTGATCCCGAATTAGTAGAAGCTTTTATTGCGGGATTTAGAAAAACCCGCCTCTTAAATCCTCTAAAATACAAAGTTCC GGATTTGCCCAAGCTCTTTTGCAGAGTTACTTTAGCGGTTGGCAATCAGTACTTTGACGGAAGGGTTTCTTATAGACTTG AAAACTCCCAAAAAGTGTTTATTAAGCTTTATCAAACTCTTTCATTTGATATGAAAGAAGCTTACGAAAAACCGCTGACC TTGTATTTTCAGGATAAGGGGATGTCGGCCTATGTTCGTGGCCATATGCAGTTTTATAATGTGTACAACCAGACGTTAAT TTTCGAGGTTAAGGAAAATCCCGGATTTGTGGTACCGGAACAGTTTGTATCGCTGCCCATTTCCCGGGGTGGACTTCTGG TAAGCGGCAGCAATAATATACCTATATTAATAGTTGAGCTTGGTGGTAACGGGTTAAGATTTGTGGTTAATAAAGCAAAG TTAAAAGAAGTAGGCCTTGTATTAAAAGAAAATACCAGGGTAACAATACTTTTTGGATTAAAAGTTGAGGAGGAAGAGCA GTATTTTGGATTTAAGGGAACGATTATCGAAACTCCTAAAACATCATTAAACGAGTCTTACCTTGTGAAATTCGAAGATG TGGATGAAAAACATCGAGATAGACTTATAAGTACCCTCTTAAAATACCAGATAAGTTTACGCCGGCGTGGTTTGCTGTAA
Upstream 100 bases:
>100_bases ATGGGCTGTTTCGTTTCGTAACCCATAAAGATGTTACGAAAGGTGATATTGATAAATTTGTCGAAATTTTAGCTAAAACT ATGCAGGTAGGGGAACAGGT
Downstream 100 bases:
>100_bases TAAGTATTGACGAAAAAATAAAATAGTATTAATTTATTTTTTGTAAATAAAAACTTACCTGAAGGAGCGTGAAAAGATGG AAACGAGAGAGTTAGTGATA
Product: HDIG domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MNFKWIIESYGEYLERISHKFQDILTEQNGAFILLVEVSESNRYVCRFCEFAGNVPYDLKREINEKVNGSLIPGNLDWLK TLTEPRVLNKDQVQSYFPELNQVEVMQIIPIYVDKNSKNIMIIGYFQDLTPSSISFNVNELQNYLYIEQFYNLIFEIIIM FNRVIEEKEPLIRGHMERVVEYADLIAGEIGREETQRLILQIAGAVHDVGKIMVPDFILQHIGKYTEEMRQKMQKHSEFG YELLKNLPMFNEVAEVILYHHEHYDGQGYPKGLKGNEIPLYSRILAIADSFDAMVSERVYKVSMGYDEALEELVNNKGKQ FDPELVEAFIAGFRKTRLLNPLKYKVPDLPKLFCRVTLAVGNQYFDGRVSYRLENSQKVFIKLYQTLSFDMKEAYEKPLT LYFQDKGMSAYVRGHMQFYNVYNQTLIFEVKENPGFVVPEQFVSLPISRGGLLVSGSNNIPILIVELGGNGLRFVVNKAK LKEVGLVLKENTRVTILFGLKVEEEEQYFGFKGTIIETPKTSLNESYLVKFEDVDEKHRDRLISTLLKYQISLRRRGLL
Sequences:
>Translated_559_residues MNFKWIIESYGEYLERISHKFQDILTEQNGAFILLVEVSESNRYVCRFCEFAGNVPYDLKREINEKVNGSLIPGNLDWLK TLTEPRVLNKDQVQSYFPELNQVEVMQIIPIYVDKNSKNIMIIGYFQDLTPSSISFNVNELQNYLYIEQFYNLIFEIIIM FNRVIEEKEPLIRGHMERVVEYADLIAGEIGREETQRLILQIAGAVHDVGKIMVPDFILQHIGKYTEEMRQKMQKHSEFG YELLKNLPMFNEVAEVILYHHEHYDGQGYPKGLKGNEIPLYSRILAIADSFDAMVSERVYKVSMGYDEALEELVNNKGKQ FDPELVEAFIAGFRKTRLLNPLKYKVPDLPKLFCRVTLAVGNQYFDGRVSYRLENSQKVFIKLYQTLSFDMKEAYEKPLT LYFQDKGMSAYVRGHMQFYNVYNQTLIFEVKENPGFVVPEQFVSLPISRGGLLVSGSNNIPILIVELGGNGLRFVVNKAK LKEVGLVLKENTRVTILFGLKVEEEEQYFGFKGTIIETPKTSLNESYLVKFEDVDEKHRDRLISTLLKYQISLRRRGLL >Mature_559_residues MNFKWIIESYGEYLERISHKFQDILTEQNGAFILLVEVSESNRYVCRFCEFAGNVPYDLKREINEKVNGSLIPGNLDWLK TLTEPRVLNKDQVQSYFPELNQVEVMQIIPIYVDKNSKNIMIIGYFQDLTPSSISFNVNELQNYLYIEQFYNLIFEIIIM FNRVIEEKEPLIRGHMERVVEYADLIAGEIGREETQRLILQIAGAVHDVGKIMVPDFILQHIGKYTEEMRQKMQKHSEFG YELLKNLPMFNEVAEVILYHHEHYDGQGYPKGLKGNEIPLYSRILAIADSFDAMVSERVYKVSMGYDEALEELVNNKGKQ FDPELVEAFIAGFRKTRLLNPLKYKVPDLPKLFCRVTLAVGNQYFDGRVSYRLENSQKVFIKLYQTLSFDMKEAYEKPLT LYFQDKGMSAYVRGHMQFYNVYNQTLIFEVKENPGFVVPEQFVSLPISRGGLLVSGSNNIPILIVELGGNGLRFVVNKAK LKEVGLVLKENTRVTILFGLKVEEEEQYFGFKGTIIETPKTSLNESYLVKFEDVDEKHRDRLISTLLKYQISLRRRGLL
Specific function: Unknown
COG id: COG2206
COG function: function code T; HD-GYP domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64965; Mature: 64965
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFKWIIESYGEYLERISHKFQDILTEQNGAFILLVEVSESNRYVCRFCEFAGNVPYDLK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHH REINEKVNGSLIPGNLDWLKTLTEPRVLNKDQVQSYFPELNQVEVMQIIPIYVDKNSKNI HHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEEECCCCEE MIIGYFQDLTPSSISFNVNELQNYLYIEQFYNLIFEIIIMFNRVIEEKEPLIRGHMERVV EEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EYADLIAGEIGREETQRLILQIAGAVHDVGKIMVPDFILQHIGKYTEEMRQKMQKHSEFG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YELLKNLPMFNEVAEVILYHHEHYDGQGYPKGLKGNEIPLYSRILAIADSFDAMVSERVY HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE KVSMGYDEALEELVNNKGKQFDPELVEAFIAGFRKTRLLNPLKYKVPDLPKLFCRVTLAV EEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHH GNQYFDGRVSYRLENSQKVFIKLYQTLSFDMKEAYEKPLTLYFQDKGMSAYVRGHMQFYN CCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCEEHHHHHHHHHH VYNQTLIFEVKENPGFVVPEQFVSLPISRGGLLVSGSNNIPILIVELGGNGLRFVVNKAK HHCCEEEEEEECCCCEECCHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEHHH LKEVGLVLKENTRVTILFGLKVEEEEQYFGFKGTIIETPKTSLNESYLVKFEDVDEKHRD HHHHCEEEECCCEEEEEEEEEECCCHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHH RLISTLLKYQISLRRRGLL HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNFKWIIESYGEYLERISHKFQDILTEQNGAFILLVEVSESNRYVCRFCEFAGNVPYDLK CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHCCCCCHHHH REINEKVNGSLIPGNLDWLKTLTEPRVLNKDQVQSYFPELNQVEVMQIIPIYVDKNSKNI HHHHHHCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEEEEEEEECCCCEE MIIGYFQDLTPSSISFNVNELQNYLYIEQFYNLIFEIIIMFNRVIEEKEPLIRGHMERVV EEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EYADLIAGEIGREETQRLILQIAGAVHDVGKIMVPDFILQHIGKYTEEMRQKMQKHSEFG HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YELLKNLPMFNEVAEVILYHHEHYDGQGYPKGLKGNEIPLYSRILAIADSFDAMVSERVY HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE KVSMGYDEALEELVNNKGKQFDPELVEAFIAGFRKTRLLNPLKYKVPDLPKLFCRVTLAV EEECCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHH GNQYFDGRVSYRLENSQKVFIKLYQTLSFDMKEAYEKPLTLYFQDKGMSAYVRGHMQFYN CCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCEEHHHHHHHHHH VYNQTLIFEVKENPGFVVPEQFVSLPISRGGLLVSGSNNIPILIVELGGNGLRFVVNKAK HHCCEEEEEEECCCCEECCHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEHHH LKEVGLVLKENTRVTILFGLKVEEEEQYFGFKGTIIETPKTSLNESYLVKFEDVDEKHRD HHHHCEEEECCCEEEEEEEEEECCCHHHCCCCCEEEECCCCCCCCCEEEEECCCCHHHHH RLISTLLKYQISLRRRGLL HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]